Gm11334 Pseudogene Detail

Summary

• Symbol
  Gm11334
• Name
  predicted gene 11334

• Feature Type
  pseudogene
• IDs
  MGI:3649250
  NCBI Gene: 105245365
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:23566675-23566830 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 9.55 cM

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649250	pseudogene	Chr13:23566467-23566883 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010988	pseudogene	Chr13:20781936-20782091 (+)
A/J	MGP_AJ_G0010992	pseudogene	Chr13:20395901-20396056 (+)
AKR/J	MGP_AKRJ_G0010945	pseudogene	Chr13:20637547-20637702 (+)
BALB/cJ	MGP_BALBcJ_G0010965	pseudogene	Chr13:20386361-20386516 (+)
C3H/HeJ	MGP_C3HHeJ_G0010864	pseudogene	Chr13:20726955-20727110 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011247	pseudogene	Chr13:21535150-21535305 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009835	pseudogene	Chr13:19218615-19218770 (+)
CAST/EiJ	MGP_CASTEiJ_G0010688	pseudogene	Chr13:20409317-20409472 (+)
CBA/J	MGP_CBAJ_G0010837	pseudogene	Chr13:22345826-22345981 (+)
DBA/2J	MGP_DBA2J_G0010884	pseudogene	Chr13:19980514-19980669 (+)
FVB/NJ	MGP_FVBNJ_G0010895	pseudogene	Chr13:19595276-19595431 (+)
LP/J	MGP_LPJ_G0010970	pseudogene	Chr13:21108122-21108277 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010881	pseudogene	Chr13:22696463-22696618 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011225	pseudogene	Chr13:20499825-20499980 (+)
PWK/PhJ	MGP_PWKPhJ_G0010573	pseudogene	Chr13:19967848-19968003 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010393	pseudogene	Chr13:19299416-19299571 (+)
WSB/EiJ	MGP_WSBEiJ_G0010735	pseudogene	Chr13:20607144-20607299 (+)

Homology

• Gene Tree
  Gm11334
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11334
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000083667 (Evidence)
• NCBI Gene
  105245365

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083667	Ensembl Gene Model | MGI Sequence Detail	156	C57BL/6J
transcript	ENSMUST00000121969	Ensembl | MGI Sequence Detail	156	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69