Gm12441 Pseudogene Detail

Summary

• Symbol
  Gm12441
• Name
  predicted gene 12441

• Feature Type
  pseudogene
• IDs
  MGI:3649265
  NCBI Gene: 102631982
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:99007983-99008470 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 43.03 cM

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649265	pseudogene	Chr3:99007883-99008470 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012307	pseudogene	Chr3:100163243-100163826 (-)
A/J	MGP_AJ_G0012301	pseudogene	Chr3:96967940-96968523 (-)
AKR/J	MGP_AKRJ_G0012267	pseudogene	Chr3:99307976-99308563 (-)
BALB/cJ	MGP_BALBcJ_G0012284	pseudogene	Chr3:96776104-96776687 (-)
C3H/HeJ	MGP_C3HHeJ_G0012149	pseudogene	Chr3:99656748-99657331 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012596	pseudogene	Chr3:103857256-103857843 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010979	pseudogene	Chr3:93259192-93259778 (-)
CAST/EiJ	MGP_CASTEiJ_G0011921	pseudogene	Chr3:98778959-98779542 (-)
CBA/J	MGP_CBAJ_G0012127	pseudogene	Chr3:107546216-107546799 (-)
DBA/2J	MGP_DBA2J_G0012183	pseudogene	Chr3:96253038-96253625 (-)
FVB/NJ	MGP_FVBNJ_G0012186	pseudogene	Chr3:94197639-94198222 (-)
LP/J	MGP_LPJ_G0012253	pseudogene	Chr3:101529991-101530574 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012190	pseudogene	Chr3:113658707-113659290 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012602	pseudogene	Chr3:98870198-98870781 (-)
PWK/PhJ	MGP_PWKPhJ_G0011766	pseudogene	Chr3:96018343-96018937 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011580	pseudogene	Chr3:96953539-96954121 (-)
WSB/EiJ	MGP_WSBEiJ_G0011951	pseudogene	Chr3:99417721-99418304 (-)

Homology

• Gene Tree
  Gm12441
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12441
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000083888 (Evidence)
• NCBI Gene
  102631982

Representative Sequences			Length	Strain/Species
genomic	102631982	NCBI Gene Model | MGI Sequence Detail	488	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;