Gm13291 Gene Detail

Summary

• Symbol
  Gm13291
• Name
  predicted gene 13291

• Feature Type
  lncRNA gene
• IDs
  MGI:3649284
  NCBI Gene: 108168739
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:11389814-11391875 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 8.64 cM

Strain
Comparison

• SNPs within 2kb
  225 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649284	lncRNA gene	Chr2:11389746-11392514 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005869	lincRNA gene	Chr2:8774817-8776878 (+)
A/J	MGP_AJ_G0005861	lincRNA gene	Chr2:8413977-8416022 (+)
AKR/J	MGP_AKRJ_G0005836	lincRNA gene	Chr2:8704056-8706109 (+)
BALB/cJ	MGP_BALBcJ_G0005840	lincRNA gene	Chr2:8392173-8394214 (+)
C3H/HeJ	MGP_C3HHeJ_G0005787	lincRNA gene	Chr2:8624070-8626091 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006000	lincRNA gene	Chr2:9023591-9025616 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0005724	lincRNA gene	Chr2:8656801-8658734 (+)
CBA/J	MGP_CBAJ_G0005772	lincRNA gene	Chr2:9378742-9380809 (+)
DBA/2J	MGP_DBA2J_G0005793	lincRNA gene	Chr2:8334050-8336083 (+)
FVB/NJ	MGP_FVBNJ_G0005819	lincRNA gene	Chr2:8256519-8258552 (+)
LP/J	MGP_LPJ_G0005873	lincRNA gene	Chr2:8695852-8697873 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005806	lincRNA gene	Chr2:9295768-9299620 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005997	lincRNA gene	Chr2:8635462-8637509 (+)
PWK/PhJ	MGP_PWKPhJ_G0005673	lincRNA gene	Chr2:8300278-8302245 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0005777	lincRNA gene	Chr2:8710848-8713754 (+)

Homology

• Gene Tree
  Gm13291
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000086491 (Evidence)
• NCBI Gene
  108168739

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086491	Ensembl Gene Model | MGI Sequence Detail	2062	C57BL/6J
transcript	ENSMUST00000143527	Ensembl | MGI Sequence Detail	655	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;