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Gm13817 Gene Detail
Summary
  • Symbol
    Gm13817
  • Name
    predicted gene 13817
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3649315
    NCBI Gene: 102634017
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:92360039-92371325 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 51.11 cM
Strain
Comparison
more
  • SNPs within 2kb
    331 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649315
 lncRNA gene Chr2:92355396-92371393 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005964
 lincRNA gene Chr2:93968076-93979402 (-)
A/J MGP_AJ_G0005957
 lincRNA gene Chr2:90163134-90174449 (-)
AKR/J MGP_AKRJ_G0005932
 lincRNA gene Chr2:92662069-92673402 (-)
BALB/cJ MGP_BALBcJ_G0005935
 lincRNA gene Chr2:90351785-90363102 (-)
C3H/HeJ MGP_C3HHeJ_G0005883
 lincRNA gene Chr2:92959754-92971137 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006096
 lincRNA gene Chr2:97189376-97201900 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005427
 lincRNA gene Chr2:86659277-86670771 (-)
CAST/EiJ MGP_CASTEiJ_G0005819
 lincRNA gene Chr2:93518359-93529466 (-)
CBA/J MGP_CBAJ_G0005868
 lincRNA gene Chr2:100567628-100580982 (-)
DBA/2J MGP_DBA2J_G0005889
 lincRNA gene Chr2:89757119-89769740 (-)
FVB/NJ MGP_FVBNJ_G0005914
 lincRNA gene Chr2:88869534-88880871 (-)
LP/J MGP_LPJ_G0005969
 lincRNA gene Chr2:94162402-94174799 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005901
 lincRNA gene Chr2:103531176-103544199 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006093
 lincRNA gene Chr2:92750969-92762261 (-)
PWK/PhJ MGP_PWKPhJ_G0005768
 lincRNA gene Chr2:89509228-89520343 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005679
 lincRNA gene Chr2:92326491-92340088 (-)
WSB/EiJ MGP_WSBEiJ_G0005872
 lincRNA gene Chr2:93364990-93376300 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    5 involving Gm13817
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    37
  • RefSeq
    16
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085293 Ensembl Gene Model | MGI Sequence Detail 11287 C57BL/6J ±  kb
transcript ENSMUST00000142249 Ensembl | MGI Sequence Detail 604 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 14
    Phenotypes 8
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:357900 Cecchini K, et al., Mouse Pachytene piRNAs Cleave Hundreds of Transcripts, But Alter the Steady-State Abundance of Only a Minority of Targets. bioRxiv. 2024;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory