Gm12217 Pseudogene Detail

Summary

• Symbol
  Gm12217
• Name
  predicted gene 12217

• Feature Type
  pseudogene
• IDs
  MGI:3649337
  NCBI Gene: 100502762
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:53793016-53794394 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 32.02 cM

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649337	pseudogene	Chr11:53793016-53794394 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010707	pseudogene	Chr11:53340093-53341169 (+)
A/J	MGP_AJ_G0010705	pseudogene	Chr11:51339088-51341661 (+)
AKR/J	MGP_AKRJ_G0010664	pseudogene	Chr11:53015358-53028214 (+)
BALB/cJ	MGP_BALBcJ_G0010676	pseudogene	Chr11:51676979-51678150 (+)
C3H/HeJ	MGP_C3HHeJ_G0010590	pseudogene	Chr11:52980244-52981473 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010954	pseudogene	Chr11:54962989-54965798 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009588	pseudogene	Chr11:48838953-48840399 (+)
CAST/EiJ	MGP_CASTEiJ_G0010414	pseudogene	Chr11:53014857-53016707 (+)
CBA/J	MGP_CBAJ_G0010565	pseudogene	Chr11:57567812-57571885 (+)
DBA/2J	MGP_DBA2J_G0010602	pseudogene	Chr11:51065408-51067322 (+)
FVB/NJ	MGP_FVBNJ_G0010618	pseudogene	Chr11:50702818-50704037 (+)
LP/J	MGP_LPJ_G0010690	pseudogene	Chr11:53785032-53787534 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010593	pseudogene	Chr11:58822954-58824190 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010926	pseudogene	Chr11:53041969-53043341 (+)
PWK/PhJ	MGP_PWKPhJ_G0010309	pseudogene	Chr11:51584428-51585742 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010118	pseudogene	Chr11:52832557-52833863 (+)
WSB/EiJ	MGP_WSBEiJ_G0010472	pseudogene	Chr11:52677019-52678183 (+)

Homology

• Gene Tree
  Gm12217
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Targeted
  1
• Genomic Mutations
  2 involving Gm12217
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082271 (Evidence)
• NCBI Gene
  100502762

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082271	Ensembl Gene Model | MGI Sequence Detail	1379	C57BL/6J
transcript	ENSMUST00000118858	Ensembl | MGI Sequence Detail	696	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:60187 Zhu Y, et al., Genomic interval engineering of mice identifies a novel modulator of triglyceride production. Proc Natl Acad Sci U S A. 2000 Feb 1;97(3):1137-42