Gm13876 Pseudogene Detail

Summary

• Symbol
  Gm13876
• Name
  predicted gene 13876

• Feature Type
  pseudogene
• IDs
  MGI:3649351
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:103718669-103718929 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 54.43 cM

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649351	pseudogene	Chr2:103718669-103718929 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011799	pseudogene	Chr2:105894227-105894487 (+)
A/J	MGP_AJ_G0011790	pseudogene	Chr2:101517772-101518032 (+)
AKR/J	MGP_AKRJ_G0011759	pseudogene	Chr2:104269848-104270108 (+)
BALB/cJ	MGP_BALBcJ_G0011767	pseudogene	Chr2:101814496-101814756 (+)
C3H/HeJ	MGP_C3HHeJ_G0011655	pseudogene	Chr2:104614490-104614750 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012071	pseudogene	Chr2:109438628-109438888 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010564	pseudogene	Chr2:97193402-97193661 (+)
CAST/EiJ	MGP_CASTEiJ_G0011442	pseudogene	Chr2:105087864-105088124 (+)
CBA/J	MGP_CBAJ_G0011632	pseudogene	Chr2:113147397-113147657 (+)
DBA/2J	MGP_DBA2J_G0011683	pseudogene	Chr2:101078354-101078614 (+)
FVB/NJ	MGP_FVBNJ_G0011685	pseudogene	Chr2:100073500-100073760 (+)
LP/J	MGP_LPJ_G0011752	pseudogene	Chr2:106021061-106021321 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011689	pseudogene	Chr2:117091046-117091306 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012065	pseudogene	Chr2:104493360-104493620 (+)
PWK/PhJ	MGP_PWKPhJ_G0011292	pseudogene	Chr2:100594389-100594649 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011115	pseudogene	Chr2:103705507-103705767 (+)
WSB/EiJ	MGP_WSBEiJ_G0011466	pseudogene	Chr2:105201220-105201480 (+)

Homology

• Gene Tree
  Gm13876
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm13876
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083643 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083643	Ensembl Gene Model | MGI Sequence Detail	261	C57BL/6J
transcript	ENSMUST00000118451	Ensembl | MGI Sequence Detail	261	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17