Gm11529 Gene Detail

Summary

• Symbol
  Gm11529
• Name
  predicted gene 11529

• Feature Type
  lncRNA gene
• IDs
  MGI:3649352
  NCBI Gene: 100038600
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:96339149-96355373 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 59.92 cM

Strain
Comparison

• SNPs within 2kb
  547 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649352	lncRNA gene	Chr11:96337725-96355373 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015197	unclassified non-coding RNA gene	Chr11:98774197-98791504 (-)
A/J	MGP_AJ_G0015171	unclassified non-coding RNA gene	Chr11:94732026-94748296 (-)
AKR/J	MGP_AKRJ_G0015134	unclassified non-coding RNA gene	Chr11:97664632-97682183 (-)
BALB/cJ	MGP_BALBcJ_G0015133	unclassified non-coding RNA gene	Chr11:95234496-95250649 (-)
C3H/HeJ	MGP_C3HHeJ_G0014957	unclassified non-coding RNA gene	Chr11:97794557-97810705 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015590	unclassified non-coding RNA gene	Chr11:101861944-101878024 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013333	unclassified non-coding RNA gene	Chr11:92217413-92233886 (-)
CAST/EiJ	MGP_CASTEiJ_G0014510	unclassified non-coding RNA gene	Chr11:98626305-98643952 (-)
CBA/J	MGP_CBAJ_G0014936	unclassified non-coding RNA gene	Chr11:106019205-106040978 (-)
DBA/2J	MGP_DBA2J_G0015029	unclassified non-coding RNA gene	Chr11:94299194-94315364 (-)
FVB/NJ	MGP_FVBNJ_G0015041	unclassified non-coding RNA gene	Chr11:93778186-93794277 (-)
LP/J	MGP_LPJ_G0015110	unclassified non-coding RNA gene	Chr11:99302005-99318799 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015067	unclassified non-coding RNA gene	Chr11:106009211-106025366 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015629	unclassified non-coding RNA gene	Chr11:97972664-97988843 (-)
PWK/PhJ	MGP_PWKPhJ_G0014302	unclassified non-coding RNA gene	Chr11:95260259-95276406 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014089	unclassified non-coding RNA gene	Chr11:97699745-97716498 (-)
WSB/EiJ	MGP_WSBEiJ_G0014613	unclassified non-coding RNA gene	Chr11:97866910-97883029 (-)

Homology

• Gene Tree
  Gm11529
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm11529
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000075586 (Evidence)
• NCBI Gene
  100038600

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000075586	Ensembl Gene Model | MGI Sequence Detail	16225	C57BL/6J
transcript	ENSMUST00000153012	Ensembl | MGI Sequence Detail	639	Not Applicable
polypeptide	Q3UUH9	UniProt | EBI | MGI Sequence Detail	116	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 13

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52