Gm14397 Gene Detail

Summary

• Symbol
  Gm14397
• Name
  predicted gene 14397

• Feature Type
  lncRNA gene
• IDs
  MGI:3649371
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:165001332-165005889 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 85.48 cM

Strain
Comparison

• SNPs within 2kb
  234 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649371	lncRNA gene	Chr2:165001332-165005889 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003696	antisense lncRNA gene	Chr2:170695600-170700146 (+)
A/J	MGP_AJ_G0003677	antisense lncRNA gene	Chr2:163705083-163709639 (+)
AKR/J	MGP_AKRJ_G0003655	antisense lncRNA gene	Chr2:168584908-168589463 (+)
BALB/cJ	MGP_BALBcJ_G0003666	antisense lncRNA gene	Chr2:164069100-164073656 (+)
C3H/HeJ	MGP_C3HHeJ_G0003613	antisense lncRNA gene	Chr2:168942420-168946972 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003805	antisense lncRNA gene	Chr2:175643312-175647869 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003311	antisense lncRNA gene	Chr2:157108056-157112617 (+)
CAST/EiJ	MGP_CASTEiJ_G0003576	antisense lncRNA gene	Chr2:169360825-169365382 (+)
CBA/J	MGP_CBAJ_G0003610	antisense lncRNA gene	Chr2:182018600-182023155 (+)
DBA/2J	MGP_DBA2J_G0003617	antisense lncRNA gene	Chr2:162868203-162872760 (+)
FVB/NJ	MGP_FVBNJ_G0003639	antisense lncRNA gene	Chr2:161307625-161312182 (+)
LP/J	MGP_LPJ_G0003696	antisense lncRNA gene	Chr2:170749603-170754149 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003627	antisense lncRNA gene	Chr2:185548280-185552836 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003806	antisense lncRNA gene	Chr2:168478079-168482631 (+)
PWK/PhJ	MGP_PWKPhJ_G0003531	antisense lncRNA gene	Chr2:162473263-162477822 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003474	antisense lncRNA gene	Chr2:167391231-167395797 (+)
WSB/EiJ	MGP_WSBEiJ_G0003611	antisense lncRNA gene	Chr2:169374902-169379459 (+)

Homology

• Gene Tree
  Gm14397
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000086630 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086630	Ensembl Gene Model | MGI Sequence Detail	4558	C57BL/6J
transcript	ENSMUST00000124728	Ensembl | MGI Sequence Detail	576	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;