Gm13930 Pseudogene Detail

Summary

• Symbol
  Gm13930
• Name
  predicted gene 13930

• Feature Type
  pseudogene
• IDs
  MGI:3649395
  NCBI Gene: 100417115
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:111570450-111571179 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 56.75 cM

Strain
Comparison

• SNPs within 2kb
  212 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649395	pseudogene	Chr2:111570341-111571226 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011825	pseudogene	Chr2:114201915-114205256 (+)
A/J	MGP_AJ_G0011815	pseudogene	Chr2:109489945-109490630 (+)
AKR/J	MGP_AKRJ_G0011784	pseudogene	Chr2:112490193-112493087 (+)
BALB/cJ	MGP_BALBcJ_G0011793	pseudogene	Chr2:109726424-109727153 (+)
C3H/HeJ	MGP_C3HHeJ_G0011679	pseudogene	Chr2:112914437-112915647 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012097	pseudogene	Chr2:117938762-117939507 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010585	pseudogene	Chr2:104764975-104765331 (+)
CAST/EiJ	MGP_CASTEiJ_G0011466	pseudogene	Chr2:113266474-113267204 (+)
CBA/J	MGP_CBAJ_G0011654	pseudogene	Chr2:122018171-122022764 (+)
DBA/2J	MGP_DBA2J_G0011708	pseudogene	Chr2:108948375-108949104 (+)
FVB/NJ	MGP_FVBNJ_G0011710	pseudogene	Chr2:107846515-107850285 (+)
LP/J	MGP_LPJ_G0011777	pseudogene	Chr2:114395510-114396251 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011715	pseudogene	Chr2:126415427-126419169 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012090	pseudogene	Chr2:112656883-112663009 (+)
PWK/PhJ	MGP_PWKPhJ_G0011317	pseudogene	Chr2:108482490-108483568 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013340	pseudogene	ChrX:4954451-4954826 (-)
WSB/EiJ	MGP_WSBEiJ_G0011490	pseudogene	Chr2:113457112-113462813 (+)

Homology

• Gene Tree
  Gm13930
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm13930
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084134 (Evidence)
• NCBI Gene
  100417115

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084134	Ensembl Gene Model | MGI Sequence Detail	730	C57BL/6J
transcript	ENSMUST00000118569	Ensembl | MGI Sequence Detail	368	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17