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Gm12790 Gene Detail
Summary
  • Symbol
    Gm12790
  • Name
    predicted gene 12790
  • Feature Type
    protein coding gene
  • IDs
    MGI:3649398
    NCBI Gene: 115489970
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:101823444-101832302 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 46.99 cM
Strain
Comparison
more
  • SNPs within 2kb
    210 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649398
 protein coding gene Chr4:101823444-101838246 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028498
 protein coding gene Chr4:102304298-102307000 (-)
A/J MGP_AJ_G0028461
 protein coding gene Chr4:98741899-98744806 (-)
AKR/J MGP_AKRJ_G0028408
 protein coding gene Chr4:101129216-101131648 (-)
BALB/cJ MGP_BALBcJ_G0028480
 protein coding gene Chr4:98932449-98936939 (-)
C3H/HeJ MGP_C3HHeJ_G0028194
 protein coding gene Chr4:101909308-101912221 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028920
 protein coding gene Chr4:106160638-106163721 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026211
 protein coding gene Chr4:93987828-93990221 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0028164
 protein coding gene Chr4:109507601-109515689 (-)
DBA/2J MGP_DBA2J_G0028311
 protein coding gene Chr4:98422131-98424625 (-)
FVB/NJ MGP_FVBNJ_G0028278
 protein coding gene Chr4:97267808-97272629 (-)
LP/J MGP_LPJ_G0022764
 protein coding gene Chr16:46653582-46658849 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0028955
 protein coding gene Chr4:101362495-101364986 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0027179
 protein coding gene Chr4:98785739-98788049 (-)
WSB/EiJ MGP_WSBEiJ_G0027710
 protein coding gene Chr4:101529630-101532913 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 115489970 NCBI Gene Model | MGI Sequence Detail 8859 C57BL/6J ±  kb
transcript NM_001377350 RefSeq | MGI Sequence Detail 2157 C57BL/6  
polypeptide NP_001364279 RefSeq | MGI Sequence Detail 201 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR050694 PRAME domain-containing protein
References
more
  • Summaries
    All 16
    Phenotypes 9
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory