Gm14252 Gene Detail

Summary

• Symbol
  Gm14252
• Name
  predicted gene 14252

• Feature Type
  lncRNA gene
• IDs
  MGI:3649403
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:156174237-156181301 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 77.39 cM

Strain
Comparison

• SNPs within 2kb
  345 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649403	lncRNA gene	Chr2:156174237-156181301 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003677	antisense lncRNA gene	Chr2:161214178-161221201 (-)
A/J	MGP_AJ_G0003659	antisense lncRNA gene	Chr2:154813497-154820834 (-)
AKR/J	MGP_AKRJ_G0003637	antisense lncRNA gene	Chr2:159307681-159314758 (-)
BALB/cJ	MGP_BALBcJ_G0003648	antisense lncRNA gene	Chr2:155097873-155104907 (-)
C3H/HeJ	MGP_C3HHeJ_G0003595	antisense lncRNA gene	Chr2:159653916-159660942 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003787	antisense lncRNA gene	Chr2:165936777-165946591 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003293	antisense lncRNA gene	Chr2:148283636-148291202 (-)
CAST/EiJ	MGP_CASTEiJ_G0003558	antisense lncRNA gene	Chr2:159986231-159994556 (-)
CBA/J	MGP_CBAJ_G0003592	antisense lncRNA gene	Chr2:171975427-171982449 (-)
DBA/2J	MGP_DBA2J_G0003599	antisense lncRNA gene	Chr2:153980365-153987351 (-)
FVB/NJ	MGP_FVBNJ_G0003620	antisense lncRNA gene	Chr2:152355771-152362791 (-)
LP/J	MGP_LPJ_G0003677	antisense lncRNA gene	Chr2:161340151-161347178 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003608	antisense lncRNA gene	Chr2:175907435-175914467 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003787	antisense lncRNA gene	Chr2:159177766-159184797 (-)
PWK/PhJ	MGP_PWKPhJ_G0003513	antisense lncRNA gene	Chr2:153481470-153489170 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003456	antisense lncRNA gene	Chr2:158115722-158122976 (-)
WSB/EiJ	MGP_WSBEiJ_G0003592	antisense lncRNA gene	Chr2:160066114-160074647 (-)

Homology

• Gene Tree
  Gm14252
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  APF
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085546 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085546	Ensembl Gene Model | MGI Sequence Detail	7065	C57BL/6J
transcript	ENSMUST00000131801	Ensembl | MGI Sequence Detail	3215	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;