Cyp4x1os Gene Detail

Summary

• Symbol
  Cyp4x1os
• Name
  cytochrome P450, family 4, subfamily x, polypeptide 1, opposite strand
• Synonyms
  Gm12835

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3649427
  NCBI Gene: 105244662
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:114991029-114995061 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 52.78 cM

Strain
Comparison

• SNPs within 2kb
  279 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649427	antisense lncRNA gene	Chr4:114991029-114995061 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003936	antisense lncRNA gene	Chr4:115904017-115907834 (+)
A/J	MGP_AJ_G0003917	antisense lncRNA gene	Chr4:111494596-111498442 (+)
AKR/J	MGP_AKRJ_G0003894	antisense lncRNA gene	Chr4:113788710-113792523 (+)
BALB/cJ	MGP_BALBcJ_G0003903	antisense lncRNA gene	Chr4:112126406-112130211 (+)
C3H/HeJ	MGP_C3HHeJ_G0003850	antisense lncRNA gene	Chr4:115407268-115411169 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004051	antisense lncRNA gene	Chr4:120394633-120399276 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0003814	antisense lncRNA gene	Chr4:112828460-112833316 (+)
CBA/J	MGP_CBAJ_G0003843	antisense lncRNA gene	Chr4:123511822-123515698 (+)
DBA/2J	MGP_DBA2J_G0003860	antisense lncRNA gene	Chr4:112127178-112131830 (+)
FVB/NJ	MGP_FVBNJ_G0003878	antisense lncRNA gene	Chr4:110597780-110602579 (+)
LP/J	MGP_LPJ_G0003939	antisense lncRNA gene	Chr4:116113660-116117766 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003866	antisense lncRNA gene	Chr4:128652950-128657110 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004046	antisense lncRNA gene	Chr4:115040592-115046047 (+)
PWK/PhJ	MGP_PWKPhJ_G0003768	antisense lncRNA gene	Chr4:108924282-108928418 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0003849	antisense lncRNA gene	Chr4:114820181-114825470 (+)

Homology

• Gene Tree
  Cyp4x1os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Targeted
  1
• Genomic Mutations
  4 involving Cyp4x1os
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000086896 (Evidence)
• NCBI Gene
  105244662

Representative Sequences			Length	Strain/Species
genomic	105244662	NCBI Gene Model | MGI Sequence Detail	4033	C57BL/6J
transcript	NR_131922	RefSeq | MGI Sequence Detail	2003	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 13

  Phenotypes 6
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12