Gm13297 Pseudogene Detail

Summary

• Symbol
  Gm13297
• Name
  predicted gene 13297

• Feature Type
  pseudogene
• IDs
  MGI:3649442
  NCBI Gene: 100040703
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:11095641-11096574 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 8.33 cM

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649442	pseudogene	Chr2:11095562-11096774 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011525	pseudogene	Chr2:8471479-8472412 (+)
A/J	MGP_AJ_G0011519	pseudogene	Chr2:8121168-8122101 (+)
AKR/J	MGP_AKRJ_G0011484	pseudogene	Chr2:8393916-8394849 (+)
BALB/cJ	MGP_BALBcJ_G0011499	pseudogene	Chr2:8099944-8100877 (+)
C3H/HeJ	MGP_C3HHeJ_G0011385	pseudogene	Chr2:8321832-8322765 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011790	pseudogene	Chr2:8698851-8699784 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010333	pseudogene	Chr2:7582478-7583407 (+)
CAST/EiJ	MGP_CASTEiJ_G0011186	pseudogene	Chr2:8350841-8351774 (+)
CBA/J	MGP_CBAJ_G0011357	pseudogene	Chr2:9047484-9048417 (+)
DBA/2J	MGP_DBA2J_G0011414	pseudogene	Chr2:8042291-8043224 (+)
FVB/NJ	MGP_FVBNJ_G0011418	pseudogene	Chr2:7968359-7969292 (+)
LP/J	MGP_LPJ_G0011481	pseudogene	Chr2:8396760-8397693 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011414	pseudogene	Chr2:8979765-8980698 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011777	pseudogene	Chr2:8325122-8326055 (+)
PWK/PhJ	MGP_PWKPhJ_G0011043	pseudogene	Chr2:7994952-7995885 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010871	pseudogene	Chr2:8308404-8309308 (+)
WSB/EiJ	MGP_WSBEiJ_G0011209	pseudogene	Chr2:8407872-8408805 (+)

Homology

• Gene Tree
  Gm13297
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081693 (Evidence)
• NCBI Gene
  100040703

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081693	Ensembl Gene Model | MGI Sequence Detail	934	C57BL/6J
transcript	ENSMUST00000120205	Ensembl | MGI Sequence Detail	934	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;