Gm11264 Gene Detail

Summary

• Symbol
  Gm11264
• Name
  predicted gene 11264

• Feature Type
  lncRNA gene
• IDs
  MGI:3649480
  NCBI Gene: 102635575
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:81951549-81984127 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 38.40 cM

Strain
Comparison

• SNPs within 2kb
  641 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649480	lncRNA gene	Chr4:81951549-81984130 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0006451	lincRNA gene	Chr4:81577608-81604432 (-)
A/J	MGP_AJ_G0006443	lincRNA gene	Chr4:78773620-78799260 (-)
AKR/J	MGP_AKRJ_G0006417	lincRNA gene	Chr4:80803808-80833316 (-)
BALB/cJ	MGP_BALBcJ_G0006417	lincRNA gene	Chr4:79005902-79031538 (-)
C3H/HeJ	MGP_C3HHeJ_G0006367	lincRNA gene	Chr4:81369045-81395987 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0006583	lincRNA gene	Chr4:84845503-84872348 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005868	lincRNA gene	Chr4:74759202-74786592 (-)
CAST/EiJ	MGP_CASTEiJ_G0006300	lincRNA gene	Chr4:79309029-79335283 (-)
CBA/J	MGP_CBAJ_G0006350	lincRNA gene	Chr4:87447932-87478846 (-)
DBA/2J	MGP_DBA2J_G0006372	lincRNA gene	Chr4:78545842-78574792 (-)
FVB/NJ	MGP_FVBNJ_G0006394	lincRNA gene	Chr4:77527659-77560226 (-)
LP/J	MGP_LPJ_G0006453	lincRNA gene	Chr4:81949953-81975863 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006381	lincRNA gene	Chr4:92550403-92583826 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006587	lincRNA gene	Chr4:80835949-80862167 (-)
PWK/PhJ	MGP_PWKPhJ_G0006237	lincRNA gene	Chr4:76891111-76919392 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0006149	lincRNA gene	Chr4:78380385-78407066 (-)
WSB/EiJ	MGP_WSBEiJ_G0006346	lincRNA gene	Chr4:81040459-81066752 (-)

Homology

• Gene Tree
  Gm11264
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm11264
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000087110 (Evidence)
• NCBI Gene
  102635575

Representative Sequences			Length	Strain/Species
genomic	102635575	NCBI Gene Model | MGI Sequence Detail	32579	C57BL/6J
transcript	NR_151604	RefSeq | MGI Sequence Detail	2969	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm11264:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr42219	Chr4:81984126-81984130 (-)	-1 bp