Gm12244 Pseudogene Detail

Summary

• Symbol
  Gm12244
• Name
  predicted gene 12244

• Feature Type
  pseudogene
• IDs
  MGI:3649493
  NCBI Gene: 112352684
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:57771722-57772012 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 35.35 cM

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649493	pseudogene	Chr11:57771606-57772111 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010721	pseudogene	Chr11:57524047-57524337 (+)
A/J	MGP_AJ_G0010719	pseudogene	Chr11:55352597-55352887 (+)
AKR/J	MGP_AKRJ_G0010677	pseudogene	Chr11:57169055-57169345 (+)
BALB/cJ	MGP_BALBcJ_G0010689	pseudogene	Chr11:55694595-55694885 (+)
C3H/HeJ	MGP_C3HHeJ_G0010603	pseudogene	Chr11:57101255-57101545 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010966	pseudogene	Chr11:59286379-59286669 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009597	pseudogene	Chr11:52710403-52710804 (+)
CAST/EiJ	MGP_CASTEiJ_G0010426	pseudogene	Chr11:57179432-57179722 (+)
CBA/J	MGP_CBAJ_G0010578	pseudogene	Chr11:62017809-62018099 (+)
DBA/2J	MGP_DBA2J_G0010615	pseudogene	Chr11:55000346-55000636 (+)
FVB/NJ	MGP_FVBNJ_G0010632	pseudogene	Chr11:54695598-54695888 (+)
LP/J	MGP_LPJ_G0010702	pseudogene	Chr11:58050917-58051207 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010606	pseudogene	Chr11:63153259-63153549 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010939	pseudogene	Chr11:57198432-57198722 (+)
PWK/PhJ	MGP_PWKPhJ_G0010321	pseudogene	Chr11:55598680-55598970 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010130	pseudogene	Chr11:57071367-57071659 (+)
WSB/EiJ	MGP_WSBEiJ_G0010484	pseudogene	Chr11:56846145-56846435 (+)

Homology

• Gene Tree
  Gm12244
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm12244
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084223 (Evidence)
• NCBI Gene
  112352684

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084223	Ensembl Gene Model | MGI Sequence Detail	291	C57BL/6J
transcript	ENSMUST00000119500	Ensembl | MGI Sequence Detail	291	Not Applicable

References

• Summaries
  All 10

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14