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Gm13040 Gene Detail
Summary
  • Symbol
    Gm13040
  • Name
    predicted gene 13040
  • Feature Type
    protein coding gene
  • IDs
    MGI:3649498
    NCBI Gene: 100040854
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:143253641-143260146 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 77.75 cM
Strain
Comparison
more
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649498
 protein coding gene Chr4:143253632-143260148 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029083
 protein coding gene Chr4:147712621-147722330 (+)
A/J no annotation
AKR/J MGP_AKRJ_G0029002
 protein coding gene Chr4:145397999-145426086 (+)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0028788
 protein coding gene Chr4:145839322-145859179 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029502
 protein coding gene Chr4:152189631-152192352 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0028753
 protein coding gene Chr4:157461730-157470342 (+)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0028855
 protein coding gene Chr4:140341315-140347480 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0028887
 protein coding gene Chr4:160571389-160572623 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0027759
 protein coding gene Chr4:141158449-141164045 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000070616 Ensembl Gene Model | MGI Sequence Detail 6506 C57BL/6J ±  kb
transcript ENSMUST00000094521 Ensembl | MGI Sequence Detail 2075 Not Applicable  
polypeptide ENSMUSP00000092098 Ensembl | MGI Sequence Detail 481 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME
    IPR050694 PRAME domain-containing protein
Molecular
Reagents
less

  • Microarray probesets 3
References
more
  • Summaries
    All 13
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory