Gm13041 Pseudogene Detail

Summary

• Symbol
  Gm13041
• Name
  predicted gene 13041

• Feature Type
  pseudogene
• IDs
  MGI:3649499
  NCBI Gene: 626700
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:143226005-143228665 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 77.72 cM

Strain
Comparison

• SNPs within 2kb
  32 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649499	pseudogene	Chr4:143226005-143229078 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0040363	pseudogene	Chr4:140338507-140341032 (+)
AKR/J	MGP_AKRJ_G0040292	pseudogene	Chr4:144382602-144385262 (+)
BALB/cJ	MGP_BALBcJ_G0040366	pseudogene	Chr4:141019893-141022418 (+)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0040968	pseudogene	Chr4:151761753-151764413 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0040160	pseudogene	Chr4:140683082-140685750 (+)
FVB/NJ	MGP_FVBNJ_G0040116	pseudogene	Chr4:139841458-139844123 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0040108	pseudogene	Chr4:160004536-160007201 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041059	pseudogene	Chr4:144944774-144947434 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0038453	pseudogene	Chr4:140761913-140764526 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm13041
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13041
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13

• Ensembl
  ENSMUSG00000083403 (Evidence)
• NCBI Gene
  626700

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083403	Ensembl Gene Model | MGI Sequence Detail	2661	C57BL/6J
transcript	ENSMUST00000122323	Ensembl | MGI Sequence Detail	1524	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;