Gm12225 Pseudogene Detail

Summary

• Symbol
  Gm12225
• Name
  predicted gene 12225

• Feature Type
  pseudogene
• IDs
  MGI:3649520
  NCBI Gene: 100041411
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:54294966-54295263 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 32.13 cM

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649520	pseudogene	Chr11:54294966-54295263 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010712	pseudogene	Chr11:53869070-53869367 (+)
A/J	MGP_AJ_G0010710	pseudogene	Chr11:51865317-51865614 (+)
AKR/J	MGP_AKRJ_G0010670	pseudogene	Chr11:53568696-53568993 (+)
BALB/cJ	MGP_BALBcJ_G0010681	pseudogene	Chr11:52204558-52204855 (+)
C3H/HeJ	MGP_C3HHeJ_G0010595	pseudogene	Chr11:53500495-53500792 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010959	pseudogene	Chr11:55529993-55530290 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009593	pseudogene	Chr11:49314142-49314439 (+)
CAST/EiJ	MGP_CASTEiJ_G0010419	pseudogene	Chr11:53542448-53542745 (+)
CBA/J	MGP_CBAJ_G0010570	pseudogene	Chr11:58161729-58162026 (+)
DBA/2J	MGP_DBA2J_G0010607	pseudogene	Chr11:51578230-51578527 (+)
FVB/NJ	MGP_FVBNJ_G0010623	pseudogene	Chr11:51224759-51225056 (+)
LP/J	MGP_LPJ_G0010695	pseudogene	Chr11:54330241-54330538 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010598	pseudogene	Chr11:59359500-59359797 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010931	pseudogene	Chr11:53573936-53574217 (+)
PWK/PhJ	MGP_PWKPhJ_G0010314	pseudogene	Chr11:52116280-52116577 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010123	pseudogene	Chr11:53351346-53351627 (+)
WSB/EiJ	MGP_WSBEiJ_G0010477	pseudogene	Chr11:53212305-53212602 (+)

Homology

• Gene Tree
  Gm12225
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12225
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000084212 (Evidence)
• NCBI Gene
  100041411

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084212	Ensembl Gene Model | MGI Sequence Detail	298	C57BL/6J
transcript	ENSMUST00000117995	Ensembl | MGI Sequence Detail	298	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6