Gm12368 Pseudogene Detail

Summary

• Symbol
  Gm12368
• Name
  predicted gene 12368

• Feature Type
  pseudogene
• IDs
  MGI:3649555
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:35401058-35401491 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 17.39 cM

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649555	pseudogene	Chr4:35401058-35401491 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012606	pseudogene	Chr4:33028704-33029137 (+)
A/J	MGP_AJ_G0012596	pseudogene	Chr4:31816543-31816976 (+)
AKR/J	MGP_AKRJ_G0012561	pseudogene	Chr4:32669860-32670293 (+)
BALB/cJ	MGP_BALBcJ_G0012582	pseudogene	Chr4:32089178-32089611 (+)
C3H/HeJ	MGP_C3HHeJ_G0012443	pseudogene	Chr4:32981215-32981648 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012898	pseudogene	Chr4:34270054-34270487 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011222	pseudogene	Chr4:29885677-29886106 (+)
CAST/EiJ	MGP_CASTEiJ_G0012199	pseudogene	Chr4:32782856-32783288 (+)
CBA/J	MGP_CBAJ_G0012421	pseudogene	Chr4:35397961-35398394 (+)
DBA/2J	MGP_DBA2J_G0012475	pseudogene	Chr4:31779467-31779900 (+)
FVB/NJ	MGP_FVBNJ_G0012479	pseudogene	Chr4:31202183-31202616 (+)
LP/J	MGP_LPJ_G0012548	pseudogene	Chr4:33123358-33123791 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012482	pseudogene	Chr4:38024335-38024768 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012898	pseudogene	Chr4:32706913-32707346 (+)
PWK/PhJ	MGP_PWKPhJ_G0012029	pseudogene	Chr4:31824410-31824839 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011846	pseudogene	Chr4:32569606-32570036 (+)
WSB/EiJ	MGP_WSBEiJ_G0012223	pseudogene	Chr4:32682039-32682472 (+)

Homology

• Gene Tree
  Gm12368
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Chemically and radiation induced
  1
• Genomic Mutations
  1 involving Gm12368
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083934 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083934	Ensembl Gene Model | MGI Sequence Detail	434	C57BL/6J
transcript	ENSMUST00000122251	Ensembl | MGI Sequence Detail	434	Not Applicable

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;