Gm13187 Gene Detail

Summary

• Symbol
  Gm13187
• Name
  predicted gene 13187

• Feature Type
  lncRNA gene
• IDs
  MGI:3649588
  NCBI Gene: 102639987
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:4290054-4297186 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 2.49 cM

Strain
Comparison

• SNPs within 2kb
  217 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649588	lncRNA gene	Chr2:4290054-4305978 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015391	unclassified non-coding RNA gene	Chr2:1317923-1331133 (-)
A/J	MGP_AJ_G0015366	unclassified non-coding RNA gene	Chr2:1254677-1271545 (-)
AKR/J	MGP_AKRJ_G0015330	unclassified non-coding RNA gene	Chr2:1279056-1292868 (-)
BALB/cJ	MGP_BALBcJ_G0015330	unclassified non-coding RNA gene	Chr2:1226642-1242946 (-)
C3H/HeJ	MGP_C3HHeJ_G0015154	unclassified non-coding RNA gene	Chr2:1270207-1286013 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015784	unclassified non-coding RNA gene	Chr2:1318881-1334060 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013525	unclassified non-coding RNA gene	Chr2:1123646-1137014 (-)
CAST/EiJ	MGP_CASTEiJ_G0014705	unclassified non-coding RNA gene	Chr2:1265932-1281231 (-)
CBA/J	MGP_CBAJ_G0015133	unclassified non-coding RNA gene	Chr2:1377284-1393369 (-)
DBA/2J	MGP_DBA2J_G0015228	unclassified non-coding RNA gene	Chr2:1222691-1236797 (-)
FVB/NJ	MGP_FVBNJ_G0015235	unclassified non-coding RNA gene	Chr2:1223130-1236350 (-)
LP/J	MGP_LPJ_G0015308	unclassified non-coding RNA gene	Chr2:1305411-1320338 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015261	unclassified non-coding RNA gene	Chr2:1319357-1334553 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015823	unclassified non-coding RNA gene	Chr2:1272734-1288666 (-)
PWK/PhJ	MGP_PWKPhJ_G0014495	unclassified non-coding RNA gene	Chr2:1200263-1213610 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014282	unclassified non-coding RNA gene	Chr2:1284970-1298248 (-)
WSB/EiJ	MGP_WSBEiJ_G0014812	unclassified non-coding RNA gene	Chr2:1281792-1297599 (-)

Homology

• Gene Tree
  Gm13187
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000087355 (Evidence)
• NCBI Gene
  102639987

Representative Sequences			Length	Strain/Species
genomic	102639987	NCBI Gene Model | MGI Sequence Detail	7133	C57BL/6J
transcript	AK045137	GenBank | ENA | DDBJ | MGI Sequence Detail	1258	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;