Gm11573 Pseudogene Detail

Summary

• Symbol
  Gm11573
• Name
  predicted gene 11573

• Feature Type
  pseudogene
• IDs
  MGI:3649590
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:96987759-96988152 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 60.95 cM

Strain
Comparison

• SNPs within 2kb
  76 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649590	pseudogene	Chr11:96987759-96988152 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010831	pseudogene	Chr11:99479625-99480018 (+)
A/J	MGP_AJ_G0010828	pseudogene	Chr11:95407796-95408189 (+)
AKR/J	MGP_AKRJ_G0010787	pseudogene	Chr11:98371250-98371643 (+)
BALB/cJ	MGP_BALBcJ_G0010803	pseudogene	Chr11:95895998-95896391 (+)
C3H/HeJ	MGP_C3HHeJ_G0010708	pseudogene	Chr11:98478336-98478729 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011076	pseudogene	Chr11:102562075-102562468 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009694	pseudogene	Chr11:92868419-92868811 (+)
CAST/EiJ	MGP_CASTEiJ_G0010533	pseudogene	Chr11:99331433-99331826 (+)
CBA/J	MGP_CBAJ_G0010679	pseudogene	Chr11:106793334-106793727 (+)
DBA/2J	MGP_DBA2J_G0010723	pseudogene	Chr11:94958158-94958551 (+)
FVB/NJ	MGP_FVBNJ_G0010742	pseudogene	Chr11:94440403-94440796 (+)
LP/J	MGP_LPJ_G0010814	pseudogene	Chr11:100007571-100007964 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010716	pseudogene	Chr11:106691859-106692252 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011053	pseudogene	Chr11:98656207-98656600 (+)
PWK/PhJ	MGP_PWKPhJ_G0010422	pseudogene	Chr11:95931354-95931746 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010240	pseudogene	Chr11:98374062-98374455 (+)
WSB/EiJ	MGP_WSBEiJ_G0010585	pseudogene	Chr11:98567237-98567630 (+)

Homology

• Gene Tree
  Gm11573
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000084068 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084068	Ensembl Gene Model | MGI Sequence Detail	394	C57BL/6J
transcript	ENSMUST00000119956	Ensembl | MGI Sequence Detail	394	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;