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Gm12223 Gene Detail
Summary
  • Symbol
    Gm12223
  • Name
    predicted gene 12223
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3649594
    NCBI Gene: 102633420
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:54032694-54176103 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 32.13 cM
Strain
Comparison
more
  • SNPs within 2kb
    4091 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649594
 lncRNA gene Chr11:54032694-54176103 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002958
 antisense lncRNA gene Chr11:53716870-53723812 (+)
A/J MGP_AJ_G0002935
 antisense lncRNA gene Chr11:51709003-51715945 (+)
AKR/J MGP_AKRJ_G0002916
 antisense lncRNA gene Chr11:53401623-53408518 (+)
BALB/cJ MGP_BALBcJ_G0002923
 antisense lncRNA gene Chr11:52051649-52058544 (+)
C3H/HeJ MGP_C3HHeJ_G0002878
 antisense lncRNA gene Chr11:53339597-53346539 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003064
 antisense lncRNA gene Chr11:55368075-55374970 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002607
 antisense lncRNA gene Chr11:49173744-49180696 (+)
CAST/EiJ MGP_CASTEiJ_G0002849
 antisense lncRNA gene Chr11:53388510-53395447 (+)
CBA/J MGP_CBAJ_G0002875
 antisense lncRNA gene Chr11:57990634-57997566 (+)
DBA/2J MGP_DBA2J_G0002882
 antisense lncRNA gene Chr11:51423585-51430523 (+)
FVB/NJ MGP_FVBNJ_G0002900
 antisense lncRNA gene Chr11:51066481-51073409 (+)
LP/J MGP_LPJ_G0002957
 antisense lncRNA gene Chr11:54165921-54172879 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002888
 antisense lncRNA gene Chr11:59205726-59212658 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003068
 antisense lncRNA gene Chr11:53422369-53429240 (+)
PWK/PhJ MGP_PWKPhJ_G0002807
 antisense lncRNA gene Chr11:51965945-51972884 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002756
 antisense lncRNA gene Chr11:53193506-53200404 (+)
WSB/EiJ MGP_WSBEiJ_G0002878
 antisense lncRNA gene Chr11:53050640-53057534 (+)



Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    8
Representative SequencesLengthStrain/SpeciesFlank
genomic 102633420 NCBI Gene Model | MGI Sequence Detail 143410 C57BL/6J ±  kb
transcript XR_004937259 RefSeq | MGI Sequence Detail 4785 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 3
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory