Gm13466 Pseudogene Detail

Summary

• Symbol
  Gm13466
• Name
  predicted gene 13466

• Feature Type
  pseudogene
• IDs
  MGI:3649597
  NCBI Gene: 666604
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:45699484-45700482 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 27.55 cM

Strain
Comparison

• SNPs within 2kb
  157 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649597	pseudogene	Chr2:45699466-45700662 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011618	pseudogene	Chr2:44922048-44923046 (+)
A/J	MGP_AJ_G0011616	pseudogene	Chr2:43106966-43107964 (+)
AKR/J	MGP_AKRJ_G0011581	pseudogene	Chr2:44426375-44427373 (+)
BALB/cJ	MGP_BALBcJ_G0011596	pseudogene	Chr2:43185524-43186522 (+)
C3H/HeJ	MGP_C3HHeJ_G0011482	pseudogene	Chr2:44358331-44359329 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011889	pseudogene	Chr2:46250024-46251022 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010418	pseudogene	Chr2:41401143-41402124 (+)
CAST/EiJ	MGP_CASTEiJ_G0011278	pseudogene	Chr2:44418122-44419119 (+)
CBA/J	MGP_CBAJ_G0011453	pseudogene	Chr2:48008724-48009722 (+)
DBA/2J	MGP_DBA2J_G0011510	pseudogene	Chr2:42768995-42769993 (+)
FVB/NJ	MGP_FVBNJ_G0011511	pseudogene	Chr2:42559984-42560982 (+)
LP/J	MGP_LPJ_G0011575	pseudogene	Chr2:44729177-44730175 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011510	pseudogene	Chr2:48471724-48472722 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011880	pseudogene	Chr2:44347752-44348750 (+)
PWK/PhJ	MGP_PWKPhJ_G0011136	pseudogene	Chr2:42688356-42689348 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010956	pseudogene	Chr2:44456475-44457475 (+)
WSB/EiJ	MGP_WSBEiJ_G0011302	pseudogene	Chr2:44558344-44559342 (+)

Homology

• Gene Tree
  Gm13466
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083807 (Evidence)
• NCBI Gene
  666604

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083807	Ensembl Gene Model | MGI Sequence Detail	999	C57BL/6J
transcript	ENSMUST00000121515	Ensembl | MGI Sequence Detail	999	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;