Gm13444 Pseudogene Detail

Summary

• Symbol
  Gm13444
• Name
  predicted gene 13444

• Feature Type
  pseudogene
• IDs
  MGI:3649616
  NCBI Gene: 100418291
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:35373396-35373917 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 23.67 cM

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649616	pseudogene	Chr2:35373192-35373917 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011587	pseudogene	Chr2:34132439-34132960 (-)
A/J	MGP_AJ_G0011585	pseudogene	Chr2:32686252-32686773 (-)
AKR/J	MGP_AKRJ_G0011550	pseudogene	Chr2:33830169-33830690 (-)
BALB/cJ	MGP_BALBcJ_G0011565	pseudogene	Chr2:32794482-32795003 (-)
C3H/HeJ	MGP_C3HHeJ_G0011451	pseudogene	Chr2:33725708-33726229 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011858	pseudogene	Chr2:35123630-35124151 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010386	pseudogene	Chr2:31373707-31374230 (-)
CAST/EiJ	MGP_CASTEiJ_G0011248	pseudogene	Chr2:33731897-33732416 (-)
CBA/J	MGP_CBAJ_G0011423	pseudogene	Chr2:36460959-36461480 (-)
DBA/2J	MGP_DBA2J_G0011479	pseudogene	Chr2:32450153-32450674 (-)
FVB/NJ	MGP_FVBNJ_G0011480	pseudogene	Chr2:32351635-32352156 (-)
LP/J	MGP_LPJ_G0011544	pseudogene	Chr2:34055439-34055960 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011479	pseudogene	Chr2:35962052-35962573 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011849	pseudogene	Chr2:33718316-33718840 (-)
PWK/PhJ	MGP_PWKPhJ_G0011106	pseudogene	Chr2:32375406-32375924 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010926	pseudogene	Chr2:33907065-33907592 (-)
WSB/EiJ	MGP_WSBEiJ_G0011271	pseudogene	Chr2:33918413-33918934 (-)

Homology

• Gene Tree
  Gm13444
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081841 (Evidence)
• NCBI Gene
  100418291

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081841	Ensembl Gene Model | MGI Sequence Detail	522	C57BL/6J
transcript	ENSMUST00000119445	Ensembl | MGI Sequence Detail	522	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;