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Gm13380 Gene Detail
Summary
  • Symbol
    Gm13380
  • Name
    predicted gene 13380
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3649647
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:20926671-20936200 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 14.65 cM
Strain
Comparison
more
  • SNPs within 2kb
    442 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649647
 lncRNA gene Chr2:20926671-20936200 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036937
 sense intronic lncRNA gene Chr2:18707520-18717048 (-)
A/J MGP_AJ_G0036925
 sense intronic lncRNA gene Chr2:17963598-17972505 (-)
AKR/J MGP_AKRJ_G0036872
 sense intronic lncRNA gene Chr2:18604990-18613780 (-)
BALB/cJ MGP_BALBcJ_G0036916
 sense intronic lncRNA gene Chr2:18014384-18023909 (-)
C3H/HeJ MGP_C3HHeJ_G0036602
 sense intronic lncRNA gene Chr2:18478056-18487594 (-)
C57BL/6NJ MGP_C57BL6NJ_G0037429
 sense intronic lncRNA gene Chr2:19249102-19259961 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0035791
 sense intronic lncRNA gene Chr2:18443589-18453192 (-)
CBA/J MGP_CBAJ_G0036577
 sense intronic lncRNA gene Chr2:20025338-20039033 (-)
DBA/2J MGP_DBA2J_G0036753
 sense intronic lncRNA gene Chr2:17883575-17892362 (-)
FVB/NJ MGP_FVBNJ_G0036703
 sense intronic lncRNA gene Chr2:17675029-17684574 (-)
LP/J MGP_LPJ_G0036800
 sense intronic lncRNA gene Chr2:18550064-18559596 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0036710
 sense intronic lncRNA gene Chr2:19979296-19989728 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0037546
 sense intronic lncRNA gene Chr2:18497607-18507119 (-)
PWK/PhJ MGP_PWKPhJ_G0035484
 sense intronic lncRNA gene Chr2:17734457-17744195 (-)
SPRET/EiJ MGP_SPRETEiJ_G0035296
 sense intronic lncRNA gene Chr2:18696777-18706334 (-)
WSB/EiJ MGP_WSBEiJ_G0035991
 sense intronic lncRNA gene Chr2:18576252-18585786 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085206 Ensembl Gene Model | MGI Sequence Detail 9530 C57BL/6J ±  kb
transcript ENSMUST00000124322 Ensembl | MGI Sequence Detail 718 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory