Gm13566 Pseudogene Detail

Summary

• Symbol
  Gm13566
• Name
  predicted gene 13566

• Feature Type
  pseudogene
• IDs
  MGI:3649655
  NCBI Gene: 100417169
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:60407881-60409022 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 34.79 cM

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649655	pseudogene	Chr2:60407731-60409024 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011664	pseudogene	Chr2:60184548-60185689 (+)
A/J	MGP_AJ_G0011661	pseudogene	Chr2:57864556-57865697 (+)
AKR/J	MGP_AKRJ_G0011626	pseudogene	Chr2:59453307-59454448 (+)
BALB/cJ	MGP_BALBcJ_G0011642	pseudogene	Chr2:57987864-57989005 (+)
C3H/HeJ	MGP_C3HHeJ_G0011528	pseudogene	Chr2:59552491-59553632 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011936	pseudogene	Chr2:61961021-61962162 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010458	pseudogene	Chr2:55425107-55426270 (+)
CAST/EiJ	MGP_CASTEiJ_G0011320	pseudogene	Chr2:59593308-59594457 (+)
CBA/J	MGP_CBAJ_G0011499	pseudogene	Chr2:64304862-64306003 (+)
DBA/2J	MGP_DBA2J_G0011555	pseudogene	Chr2:57460579-57461720 (+)
FVB/NJ	MGP_FVBNJ_G0011558	pseudogene	Chr2:56997019-56998160 (+)
LP/J	MGP_LPJ_G0011623	pseudogene	Chr2:60026276-60027417 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011556	pseudogene	Chr2:65928496-65929637 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011928	pseudogene	Chr2:59489624-59490765 (+)
PWK/PhJ	MGP_PWKPhJ_G0011178	pseudogene	Chr2:57315122-57316253 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010997	pseudogene	Chr2:59585509-59586660 (+)
WSB/EiJ	MGP_WSBEiJ_G0011344	pseudogene	Chr2:59767703-59768844 (+)

Homology

• Gene Tree
  Gm13566
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13566
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084115 (Evidence)
• NCBI Gene
  100417169

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084115	Ensembl Gene Model | MGI Sequence Detail	1142	C57BL/6J
transcript	ENSMUST00000117428	Ensembl | MGI Sequence Detail	1142	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;