Gm13607 Pseudogene Detail

Summary

• Symbol
  Gm13607
• Name
  predicted gene 13607

• Feature Type
  pseudogene
• IDs
  MGI:3649691
  NCBI Gene: 227995
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:67912135-67912673 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 39.53 cM

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649691	pseudogene	Chr2:67911895-67913437 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011683	pseudogene	Chr2:67984671-67985208 (+)
A/J	MGP_AJ_G0011678	pseudogene	Chr2:65356727-65357265 (+)
AKR/J	MGP_AKRJ_G0011644	pseudogene	Chr2:67128909-67129447 (+)
BALB/cJ	MGP_BALBcJ_G0011659	pseudogene	Chr2:65546694-65547232 (+)
C3H/HeJ	MGP_C3HHeJ_G0011545	pseudogene	Chr2:67340165-67340703 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011954	pseudogene	Chr2:70031846-70032384 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010793	pseudogene	Chr3:27719453-27726420 (+)
CAST/EiJ	MGP_CASTEiJ_G0011335	pseudogene	Chr2:67451018-67451556 (+)
CBA/J	MGP_CBAJ_G0011518	pseudogene	Chr2:72591035-72591573 (+)
DBA/2J	MGP_DBA2J_G0011573	pseudogene	Chr2:65018278-65018816 (+)
FVB/NJ	MGP_FVBNJ_G0011575	pseudogene	Chr2:64389821-64390359 (+)
LP/J	MGP_LPJ_G0011639	pseudogene	Chr2:67833659-67834197 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011574	pseudogene	Chr2:74681273-74681811 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011946	pseudogene	Chr2:67194125-67194663 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0011013	pseudogene	Chr2:67404484-67405022 (+)
WSB/EiJ	MGP_WSBEiJ_G0011361	pseudogene	Chr2:67628073-67628611 (+)

Homology

• Gene Tree
  Gm13607
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13607
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000081257 (Evidence)
• NCBI Gene
  227995

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081257	Ensembl Gene Model | MGI Sequence Detail	539	C57BL/6J
transcript	ENSMUST00000117875	Ensembl | MGI Sequence Detail	539	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;