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Scgb1b26-ps Pseudogene Detail
Summary
  • Symbol
    Scgb1b26-ps
  • Name
    secretoglobin, family 1B, member 26, pseudogene
  • Synonyms
    Abpa26-ps
Location &
Maps
more
  • Sequence Map
    Chr7:33658230-33659411 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 19.38 cM
Strain
Comparison
more
  • SNPs within 2kb
    215 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649711
 pseudogene Chr7:33658230-33659411 (+)
129S1/SvImJ MGP_129S1SvImJ_G0040563
 pseudogene Chr7:33173851-33175032 (+)
A/J MGP_AJ_G0040553
 pseudogene Chr7:32401044-32402225 (+)
AKR/J MGP_AKRJ_G0040479
 pseudogene Chr7:33295060-33296241 (+)
BALB/cJ MGP_BALBcJ_G0040549
 pseudogene Chr7:32559705-32560886 (+)
C3H/HeJ MGP_C3HHeJ_G0040183
 pseudogene Chr7:33967008-33968189 (+)
C57BL/6NJ MGP_C57BL6NJ_G0041211
 pseudogene Chr7:34881218-34882399 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0039233
 pseudogene Chr7:25077608-25078786 (+)
CBA/J MGP_CBAJ_G0040148
 pseudogene Chr7:35896853-35898034 (+)
DBA/2J MGP_DBA2J_G0040354
 pseudogene Chr7:32140128-32141308 (+)
FVB/NJ MGP_FVBNJ_G0040296
 pseudogene Chr7:32123100-32124281 (+)
LP/J MGP_LPJ_G0040391
 pseudogene Chr7:33452529-33453710 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0040288
 pseudogene Chr7:34913999-34915180 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0041264
 pseudogene Chr7:32607917-32609099 (+)
PWK/PhJ MGP_PWKPhJ_G0038908
 pseudogene Chr7:25526643-25527825 (+)
SPRET/EiJ MGP_SPRETEiJ_G0038609
 pseudogene Chr7:22247479-22248660 (+)
WSB/EiJ MGP_WSBEiJ_G0039483
 pseudogene Chr7:33176220-33177401 (+)



Homology
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Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100043864 NCBI Gene Model | MGI Sequence Detail 1182 C57BL/6J ±  kb
transcript GU269229 GenBank | ENA | DDBJ | MGI Sequence Detail 226 C3H/HeJ  
polypeptide D2XZ32 UniProt | EBI | MGI Sequence Detail 75 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR006178 Major allergen I polypeptide chain 1
    IPR016126 Secretoglobin
    IPR053723 Secretoglobin Domain-Containing
    IPR035960 Secretoglobin superfamily
References
more
  • Summaries
    All 9
  • Earliest
    J:195039 Emes RD, et al., Comparative evolutionary genomics of androgen-binding protein genes. Genome Res. 2004 Aug;14(8):1516-29
  • Latest
    J:185789 Jackson BC, et al., Update of the human secretoglobin (SCGB) gene superfamily and an example of 'evolutionary bloom' of androgen-binding protein genes within the mouse Scgb gene superfamily. Hum Genomics. 2011 Oct;5(6):691-702
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory