Gm11624 Pseudogene Detail

Summary

• Symbol
  Gm11624
• Name
  predicted gene 11624

• Feature Type
  pseudogene
• IDs
  MGI:3649733
  NCBI Gene: 276809
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:104923860-104924900 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 68.61 cM

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649733	pseudogene	Chr11:104923659-104924902 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010857	pseudogene	Chr11:108241692-108242731 (-)
A/J	MGP_AJ_G0010854	pseudogene	Chr11:103611549-103612589 (-)
AKR/J	MGP_AKRJ_G0010814	pseudogene	Chr11:106766616-106767655 (-)
BALB/cJ	MGP_BALBcJ_G0010832	pseudogene	Chr11:104047223-104048262 (-)
C3H/HeJ	MGP_C3HHeJ_G0010733	pseudogene	Chr11:107036648-107037687 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011103	pseudogene	Chr11:111584169-111585209 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009713	pseudogene	Chr11:100968798-100969845 (-)
CAST/EiJ	MGP_CASTEiJ_G0010558	pseudogene	Chr11:108084533-108085572 (-)
CBA/J	MGP_CBAJ_G0010704	pseudogene	Chr11:116215674-116216713 (-)
DBA/2J	MGP_DBA2J_G0010751	pseudogene	Chr11:103117886-103118925 (-)
FVB/NJ	MGP_FVBNJ_G0010769	pseudogene	Chr11:102636633-102637672 (-)
LP/J	MGP_LPJ_G0010839	pseudogene	Chr11:108699346-108700385 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010745	pseudogene	Chr11:115502830-115503869 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011082	pseudogene	Chr11:107222862-107223902 (-)
PWK/PhJ	MGP_PWKPhJ_G0010448	pseudogene	Chr11:104205032-104206071 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010264	pseudogene	Chr11:106979529-106980575 (-)
WSB/EiJ	MGP_WSBEiJ_G0010610	pseudogene	Chr11:107195955-107196994 (-)

Homology

• Gene Tree
  Gm11624
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084120 (Evidence)
• NCBI Gene
  276809

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084120	Ensembl Gene Model | MGI Sequence Detail	1041	C57BL/6J
transcript	ENSMUST00000118579	Ensembl | MGI Sequence Detail	1041	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;