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Wincr1 Gene Detail
Summary
  • Symbol
    Wincr1
  • Name
    WNT induced non-coding RNA 1
  • Synonyms
    clone 17, Gm12603, Wincr1
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3649757
    NCBI Gene: 100040617
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:88968544-89002847 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 42.12 cM
Strain
Comparison
more
  • SNPs within 2kb
    1163 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649757
 lncRNA gene Chr4:88968544-89002851 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006459
 lincRNA gene Chr4:88983471-89021228 (+)
A/J MGP_AJ_G0006451
 lincRNA gene Chr4:85859471-85894252 (+)
AKR/J MGP_AKRJ_G0006425
 lincRNA gene Chr4:87980037-88016250 (+)
BALB/cJ MGP_BALBcJ_G0006425
 lincRNA gene Chr4:86088797-86128238 (+)
C3H/HeJ MGP_C3HHeJ_G0006375
 lincRNA gene Chr4:88728180-88766609 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006591
 lincRNA gene Chr4:92363924-92399033 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005876
 lincRNA gene Chr4:81797607-81832757 (+)
CAST/EiJ MGP_CASTEiJ_G0006308
 lincRNA gene Chr4:86560911-86600721 (+)
CBA/J MGP_CBAJ_G0006358
 lincRNA gene Chr4:95208312-95257301 (+)
DBA/2J MGP_DBA2J_G0006380
 lincRNA gene Chr4:85616929-85651708 (+)
FVB/NJ MGP_FVBNJ_G0006402
 lincRNA gene Chr4:84551786-84587771 (+)
LP/J MGP_LPJ_G0006461
 lincRNA gene Chr4:89266234-89306737 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006389
 lincRNA gene Chr4:100206504-100249589 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006595
 lincRNA gene Chr4:88124199-88163971 (+)
PWK/PhJ MGP_PWKPhJ_G0006245
 lincRNA gene Chr4:83905952-83941129 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006157
 lincRNA gene Chr4:85641817-85692349 (+)
WSB/EiJ MGP_WSBEiJ_G0006354
 lincRNA gene Chr4:88344214-88381565 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    2
  • Radiation induced
    1
  • Genomic Mutations
    5 involving Wincr1
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

Biological Process

Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    715
  • Tissues
    9
  • cDNA Data
    2
  • Literature Summary
    2
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100040617 NCBI Gene Model | MGI Sequence Detail 34304 C57BL/6J ±  kb
transcript NR_033533 RefSeq | MGI Sequence Detail 718 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 2
    Primer pair 1
    Other 1
Other
Accession IDs
less
MGI:3663433, MGI:6094263
References
more
  • Summaries
    All 14
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:112318 Lord-Grignon J, et al., Identification of genes expressed in retinal progenitor/stem cell colonies isolated from the ocular ciliary body of adult mice. Gene Expr Patterns. 2006 Oct 2;6(8):992-999
  • Latest
    J:248399 Mullin NK, et al., Wnt/beta-catenin Signaling Pathway Regulates Specific lncRNAs That Impact Dermal Fibroblasts and Skin Fibrosis. Front Genet. 2017;8:183
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory