Gm13428 Pseudogene Detail

Summary

• Symbol
  Gm13428
• Name
  predicted gene 13428

• Feature Type
  pseudogene
• IDs
  MGI:3649767
  NCBI Gene: 105244131
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:36027351-36027715 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 24.19 cM

Strain
Comparison

• SNPs within 2kb
  67 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649767	pseudogene	Chr2:36027351-36027715 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011589	pseudogene	Chr2:34823369-34823733 (-)
A/J	MGP_AJ_G0011587	pseudogene	Chr2:33334763-33335127 (-)
AKR/J	MGP_AKRJ_G0011552	pseudogene	Chr2:34503355-34503719 (-)
BALB/cJ	MGP_BALBcJ_G0011567	pseudogene	Chr2:33450828-33451192 (-)
C3H/HeJ	MGP_C3HHeJ_G0011453	pseudogene	Chr2:34406581-34406945 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011860	pseudogene	Chr2:35801067-35801431 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010388	pseudogene	Chr2:32027394-32027738 (-)
CAST/EiJ	MGP_CASTEiJ_G0011250	pseudogene	Chr2:34397386-34397750 (-)
CBA/J	MGP_CBAJ_G0011425	pseudogene	Chr2:37197448-37197812 (-)
DBA/2J	MGP_DBA2J_G0011481	pseudogene	Chr2:33106243-33106607 (-)
FVB/NJ	MGP_FVBNJ_G0011482	pseudogene	Chr2:33013805-33014169 (-)
LP/J	MGP_LPJ_G0011546	pseudogene	Chr2:34742098-34742462 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011481	pseudogene	Chr2:36654731-36655095 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011851	pseudogene	Chr2:34403042-34403406 (-)
PWK/PhJ	MGP_PWKPhJ_G0011108	pseudogene	Chr2:33025945-33026315 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010928	pseudogene	Chr2:34572101-34572459 (-)
WSB/EiJ	MGP_WSBEiJ_G0011273	pseudogene	Chr2:34598124-34598488 (-)

Homology

• Gene Tree
  Gm13428
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000081496 (Evidence)
• NCBI Gene
  105244131

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081496	Ensembl Gene Model | MGI Sequence Detail	365	C57BL/6J
transcript	ENSMUST00000117540	Ensembl | MGI Sequence Detail	365	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;