Gm14407 Pseudogene Detail

Summary

• Symbol
  Gm14407
• Name
  predicted gene 14407

• Feature Type
  pseudogene
• IDs
  MGI:3649809
  NCBI Gene: 108168840
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:176777149-176777595 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 99.20 cM

Strain
Comparison

• SNPs within 2kb
  50 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649809	pseudogene	Chr2:176777091-176777613 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010522	pseudogene	Chr10:60631799-60632163 (+)
A/J	MGP_AJ_G0010517	pseudogene	Chr10:58825200-58825668 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0010490	pseudogene	Chr10:58901377-58901741 (+)
C3H/HeJ	MGP_C3HHeJ_G0009955	pseudogene	Chr1:28862117-28862481 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010237	pseudogene	Chr10:60252873-60253237 (+)
CBA/J	MGP_CBAJ_G0010384	pseudogene	Chr10:65147354-65147718 (+)
DBA/2J	MGP_DBA2J_G0010416	pseudogene	Chr10:58099418-58099782 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0010506	pseudogene	Chr10:61043176-61043722 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010404	pseudogene	Chr10:67476994-67477358 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010732	pseudogene	Chr10:60176770-60177134 (+)
PWK/PhJ	MGP_PWKPhJ_G0010138	pseudogene	Chr10:57934049-57934638 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm14407
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000082023 (Evidence)
• NCBI Gene
  108168840

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082023	Ensembl Gene Model | MGI Sequence Detail	447	C57BL/6J
transcript	ENSMUST00000121260	Ensembl | MGI Sequence Detail	447	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;