Gm11393 Pseudogene Detail

Summary

• Symbol
  Gm11393
• Name
  predicted gene 11393

• Feature Type
  pseudogene
• IDs
  MGI:3649834
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:33726982-33734681 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 13.91 cM

Strain
Comparison

• SNPs within 2kb
  359 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649834	pseudogene	Chr13:33726982-33734681 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040056	pseudogene	Chr13:31675051-31682678 (+)
A/J	MGP_AJ_G0040061	pseudogene	Chr13:30730477-30742402 (+)
AKR/J	MGP_AKRJ_G0039979	pseudogene	Chr13:31429105-31434345 (+)
BALB/cJ	MGP_BALBcJ_G0040038	pseudogene	Chr13:30804194-30814351 (+)
C3H/HeJ	MGP_C3HHeJ_G0039686	pseudogene	Chr13:31367888-31371037 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040619	pseudogene	Chr13:32705406-32712341 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037140	pseudogene	Chr13:29021226-29023598 (+)
CAST/EiJ	MGP_CASTEiJ_G0038787	pseudogene	Chr13:31091008-31094267 (+)
CBA/J	MGP_CBAJ_G0039651	pseudogene	Chr13:34131373-34135925 (+)
DBA/2J	MGP_DBA2J_G0039845	pseudogene	Chr13:30222530-30227418 (+)
FVB/NJ	MGP_FVBNJ_G0039818	pseudogene	Chr13:29841002-29843774 (+)
LP/J	MGP_LPJ_G0039893	pseudogene	Chr13:31877566-31880694 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039805	pseudogene	Chr13:34322837-34334710 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040715	pseudogene	Chr13:31115378-31118074 (+)
PWK/PhJ	MGP_PWKPhJ_G0038474	pseudogene	Chr13:30333417-30339917 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038190	pseudogene	Chr13:29847149-29849504 (+)
WSB/EiJ	MGP_WSBEiJ_G0039015	pseudogene	Chr13:31466311-31473434 (+)

Homology

• Gene Tree
  Gm11393
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11393
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082722 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082722	Ensembl Gene Model | MGI Sequence Detail	7700	C57BL/6J
transcript	ENSMUST00000118019	Ensembl | MGI Sequence Detail	288	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69