Gm11392 Pseudogene Detail

Summary

• Symbol
  Gm11392
• Name
  predicted gene 11392

• Feature Type
  pseudogene
• IDs
  MGI:3649835
  NCBI Gene: 193403
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:33902259-33906038 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 13.95 cM

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649835	pseudogene	Chr13:33902258-33926119 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040059	pseudogene	Chr13:31849991-31853770 (+)
A/J	MGP_AJ_G0040064	pseudogene	Chr13:30923919-30927698 (+)
AKR/J	MGP_AKRJ_G0039982	pseudogene	Chr13:31620796-31624575 (+)
BALB/cJ	MGP_BALBcJ_G0040041	pseudogene	Chr13:30973428-30977207 (+)
C3H/HeJ	MGP_C3HHeJ_G0039689	pseudogene	Chr13:31556705-31560484 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040622	pseudogene	Chr13:32884066-32887845 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038792	pseudogene	Chr13:31253207-31256985 (+)
CBA/J	MGP_CBAJ_G0039654	pseudogene	Chr13:34307084-34310863 (+)
DBA/2J	MGP_DBA2J_G0039848	pseudogene	Chr13:30404071-30407850 (+)
FVB/NJ	MGP_FVBNJ_G0039821	pseudogene	Chr13:29994138-29997917 (+)
LP/J	MGP_LPJ_G0039896	pseudogene	Chr13:32064139-32067918 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039808	pseudogene	Chr13:34534886-34538665 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040718	pseudogene	Chr13:31279568-31283347 (+)
PWK/PhJ	MGP_PWKPhJ_G0038476	pseudogene	Chr13:30477680-30481453 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038192	pseudogene	Chr13:29962642-29967907 (+)
WSB/EiJ	MGP_WSBEiJ_G0039020	pseudogene	Chr13:31645138-31648919 (+)

Homology

• Gene Tree
  Gm11392
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11392
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000097931 (Evidence)
• NCBI Gene
  193403

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097931	Ensembl Gene Model | MGI Sequence Detail	3780	C57BL/6J
transcript	ENSMUST00000181419	Ensembl | MGI Sequence Detail	710	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69