Gm13446 Gene Detail

Summary

• Symbol
  Gm13446
• Name
  predicted gene 13446

• Feature Type
  lncRNA gene
• IDs
  MGI:3649869
  NCBI Gene: 100042194
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:35439550-35448714 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 23.73 cM

Strain
Comparison

• SNPs within 2kb
  375 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649869	lncRNA gene	Chr2:35439546-35448714 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015414	unclassified non-coding RNA gene	Chr2:34195874-34205038 (-)
A/J	MGP_AJ_G0015389	unclassified non-coding RNA gene	Chr2:32745188-32754358 (-)
AKR/J	MGP_AKRJ_G0015353	unclassified non-coding RNA gene	Chr2:33896303-33905467 (-)
BALB/cJ	MGP_BALBcJ_G0015353	unclassified non-coding RNA gene	Chr2:32858496-32867660 (-)
C3H/HeJ	MGP_C3HHeJ_G0015177	unclassified non-coding RNA gene	Chr2:33795768-33804932 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015807	unclassified non-coding RNA gene	Chr2:35194601-35203765 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013548	unclassified non-coding RNA gene	Chr2:31434519-31444076 (-)
CAST/EiJ	MGP_CASTEiJ_G0014728	unclassified non-coding RNA gene	Chr2:33797101-33806152 (-)
CBA/J	MGP_CBAJ_G0015156	unclassified non-coding RNA gene	Chr2:36532425-36541589 (-)
DBA/2J	MGP_DBA2J_G0015251	unclassified non-coding RNA gene	Chr2:32515966-32525130 (-)
FVB/NJ	MGP_FVBNJ_G0015258	unclassified non-coding RNA gene	Chr2:32422503-32431653 (-)
LP/J	MGP_LPJ_G0015331	unclassified non-coding RNA gene	Chr2:34118456-34127642 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015284	unclassified non-coding RNA gene	Chr2:36032178-36041334 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015846	unclassified non-coding RNA gene	Chr2:33788143-33797306 (-)
PWK/PhJ	MGP_PWKPhJ_G0014517	unclassified non-coding RNA gene	Chr2:32439108-32448158 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014305	unclassified non-coding RNA gene	Chr2:33974031-33983143 (-)
WSB/EiJ	MGP_WSBEiJ_G0014835	unclassified non-coding RNA gene	Chr2:33992389-34001509 (-)

Homology

• Gene Tree
  Gm13446
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000086555 (Evidence)
• NCBI Gene
  100042194

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086555	Ensembl Gene Model | MGI Sequence Detail	9165	C57BL/6J
transcript	ENSMUST00000124555	Ensembl | MGI Sequence Detail	2033	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;