Gm11722 Gene Detail

Summary

• Symbol
  Gm11722
• Name
  predicted gene 11722

• Feature Type
  lncRNA gene
• IDs
  MGI:3649870
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:107372742-107373933 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 70.29 cM

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649870	lncRNA gene	Chr11:107372742-107373933 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0036898	sense intronic lncRNA gene	Chr11:110885557-110886743 (+)
A/J	MGP_AJ_G0036886	sense intronic lncRNA gene	Chr11:106128171-106129357 (+)
AKR/J	MGP_AKRJ_G0036833	sense intronic lncRNA gene	Chr11:109301044-109302230 (+)
BALB/cJ	MGP_BALBcJ_G0036877	sense intronic lncRNA gene	Chr11:106549429-106550615 (+)
C3H/HeJ	MGP_C3HHeJ_G0036562	sense intronic lncRNA gene	Chr11:109609938-109611124 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037390	sense intronic lncRNA gene	Chr11:114307567-114308758 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034450	sense intronic lncRNA gene	Chr11:103401640-103403178 (+)
CAST/EiJ	MGP_CASTEiJ_G0035751	sense intronic lncRNA gene	Chr11:110702101-110703311 (+)
CBA/J	MGP_CBAJ_G0036537	sense intronic lncRNA gene	Chr11:119025640-119026826 (+)
DBA/2J	MGP_DBA2J_G0036714	sense intronic lncRNA gene	Chr11:105607244-105608430 (+)
FVB/NJ	MGP_FVBNJ_G0036665	sense intronic lncRNA gene	Chr11:105100718-105101904 (+)
LP/J	MGP_LPJ_G0036760	sense intronic lncRNA gene	Chr11:111331720-111332906 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036671	sense intronic lncRNA gene	Chr11:118244396-118245582 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037506	sense intronic lncRNA gene	Chr11:109837927-109840178 (+)
PWK/PhJ	MGP_PWKPhJ_G0035445	sense intronic lncRNA gene	Chr11:106735012-106736227 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035256	sense intronic lncRNA gene	Chr11:109605325-109606526 (+)
WSB/EiJ	MGP_WSBEiJ_G0035951	sense intronic lncRNA gene	Chr11:109798283-109799465 (+)

Homology

• Gene Tree
  Gm11722
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000086442 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086442	Ensembl Gene Model | MGI Sequence Detail	1192	C57BL/6J
transcript	ENSMUST00000138702	Ensembl | MGI Sequence Detail	534	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;