Gm11667 Pseudogene Detail

Summary

• Symbol
  Gm11667
• Name
  predicted gene 11667

• Feature Type
  pseudogene
• IDs
  MGI:3649871
  NCBI Gene: 100041381
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:108314099-108314584 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 71.83 cM

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649871	pseudogene	Chr11:108314099-108314584 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010865	pseudogene	Chr11:111890751-111891234 (+)
A/J	MGP_AJ_G0010862	pseudogene	Chr11:107070282-107070765 (+)
AKR/J	MGP_AKRJ_G0010822	pseudogene	Chr11:110279890-110280372 (+)
BALB/cJ	MGP_BALBcJ_G0010840	pseudogene	Chr11:107500492-107500975 (+)
C3H/HeJ	MGP_C3HHeJ_G0010741	pseudogene	Chr11:110593724-110594207 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011111	pseudogene	Chr11:115299199-115299684 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009719	pseudogene	Chr11:104334393-104334900 (+)
CAST/EiJ	MGP_CASTEiJ_G0010565	pseudogene	Chr11:111703104-111703586 (+)
CBA/J	MGP_CBAJ_G0010712	pseudogene	Chr11:120077274-120077757 (+)
DBA/2J	MGP_DBA2J_G0010759	pseudogene	Chr11:106558125-106558608 (+)
FVB/NJ	MGP_FVBNJ_G0010776	pseudogene	Chr11:106055145-106055628 (+)
LP/J	MGP_LPJ_G0010847	pseudogene	Chr11:112325133-112325616 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010752	pseudogene	Chr11:119259887-119260370 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011090	pseudogene	Chr11:110844942-110845425 (+)
PWK/PhJ	MGP_PWKPhJ_G0010455	pseudogene	Chr11:107708026-107708508 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010271	pseudogene	Chr11:110594550-110595028 (+)
WSB/EiJ	MGP_WSBEiJ_G0010618	pseudogene	Chr11:110777641-110778125 (+)

Homology

• Gene Tree
  Gm11667
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082544 (Evidence)
• NCBI Gene
  100041381

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082544	Ensembl Gene Model | MGI Sequence Detail	486	C57BL/6J
transcript	ENSMUST00000119828	Ensembl | MGI Sequence Detail	486	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;