Gm12281 Pseudogene Detail

Summary

• Symbol
  Gm12281
• Name
  predicted gene 12281

• Feature Type
  pseudogene
• IDs
  MGI:3649890
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:62588044-62588341 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 38.62 cM

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649890	pseudogene	Chr11:62588044-62588341 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010745	pseudogene	Chr11:62760312-62760610 (+)
A/J	MGP_AJ_G0010741	pseudogene	Chr11:60436970-60437268 (+)
AKR/J	MGP_AKRJ_G0010698	pseudogene	Chr11:62301645-62301942 (+)
BALB/cJ	MGP_BALBcJ_G0010714	pseudogene	Chr11:60714932-60715229 (+)
C3H/HeJ	MGP_C3HHeJ_G0010624	pseudogene	Chr11:62278706-62279004 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010990	pseudogene	Chr11:64741172-64741469 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009616	pseudogene	Chr11:57521025-57521322 (+)
CAST/EiJ	MGP_CASTEiJ_G0010447	pseudogene	Chr11:62425411-62425708 (+)
CBA/J	MGP_CBAJ_G0010598	pseudogene	Chr11:67520364-67520662 (+)
DBA/2J	MGP_DBA2J_G0010638	pseudogene	Chr11:59993840-59994137 (+)
FVB/NJ	MGP_FVBNJ_G0010652	pseudogene	Chr11:59660990-59661287 (+)
LP/J	MGP_LPJ_G0010726	pseudogene	Chr11:63306529-63306827 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010628	pseudogene	Chr11:68508495-68508792 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010962	pseudogene	Chr11:62460549-62460847 (+)
PWK/PhJ	MGP_PWKPhJ_G0010342	pseudogene	Chr11:60610969-60611266 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010151	pseudogene	Chr11:62301329-62301621 (+)
WSB/EiJ	MGP_WSBEiJ_G0010504	pseudogene	Chr11:62074730-62075027 (+)

Homology

• Gene Tree
  Gm12281
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12281
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000081852 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081852	Ensembl Gene Model | MGI Sequence Detail	298	C57BL/6J
transcript	ENSMUST00000119536	Ensembl | MGI Sequence Detail	298	Not Applicable

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6