Gm13320 Pseudogene Detail

Summary

• Symbol
  Gm13320
• Name
  predicted gene 13320

• Feature Type
  pseudogene
• IDs
  MGI:3649935
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:14194434-14194574 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 10.43 cM

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649935	pseudogene	Chr2:14194434-14194574 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0000976	unclassified gene	Chr2:11267690-11267830 (-)
AKR/J	MGP_AKRJ_G0000963	unclassified gene	Chr2:11590899-11591039 (-)
BALB/cJ	MGP_BALBcJ_G0000968	unclassified gene	Chr2:11255393-11255533 (-)
C3H/HeJ	MGP_C3HHeJ_G0000952	unclassified gene	Chr2:11539430-11539570 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0001084	unclassified gene	Chr2:12019485-12019625 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000789	unclassified gene	Chr19:51322108-51322248 (+)
CAST/EiJ	MGP_CASTEiJ_G0000784	unclassified gene	Chr13:64217090-64217230 (-)
CBA/J	MGP_CBAJ_G0000944	unclassified gene	Chr2:12531632-12531772 (-)
DBA/2J	MGP_DBA2J_G0000948	unclassified gene	Chr2:11158668-11158808 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0001002	unclassified gene	Chr2:11610756-11616652 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000949	unclassified gene	Chr2:12366239-12366379 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001076	unclassified gene	Chr2:11499146-11508638 (-)
PWK/PhJ	MGP_PWKPhJ_G0000737	unclassified gene	Chr13:61982963-61983103 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0000710	unclassified gene	Chr13:62176283-62176427 (-)
WSB/EiJ	MGP_WSBEiJ_G0000791	unclassified gene	Chr13:64477508-64477648 (-)

Homology

• Gene Tree
  Gm13320
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000083545 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083545	Ensembl Gene Model | MGI Sequence Detail	141	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;