Gm11200 Pseudogene Detail

Summary

• Symbol
  Gm11200
• Name
  predicted gene 11200

• Feature Type
  pseudogene
• IDs
  MGI:3649950
  NCBI Gene: 100042697
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:79103622-79104069 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 46.74 cM

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649950	pseudogene	Chr11:79103622-79104069 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010789	pseudogene	Chr11:80289709-80290156 (+)
A/J	MGP_AJ_G0010787	pseudogene	Chr11:77207578-77208025 (+)
AKR/J	MGP_AKRJ_G0010744	pseudogene	Chr11:79536865-79537312 (+)
BALB/cJ	MGP_BALBcJ_G0010760	pseudogene	Chr11:77621756-77622203 (+)
C3H/HeJ	MGP_C3HHeJ_G0010668	pseudogene	Chr11:79569659-79570106 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011034	pseudogene	Chr11:82767074-82767521 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009654	pseudogene	Chr11:74159837-74160299 (+)
CAST/EiJ	MGP_CASTEiJ_G0010490	pseudogene	Chr11:80053055-80053502 (+)
CBA/J	MGP_CBAJ_G0010642	pseudogene	Chr11:86364849-86365296 (+)
DBA/2J	MGP_DBA2J_G0010681	pseudogene	Chr11:76766734-76767181 (+)
FVB/NJ	MGP_FVBNJ_G0010697	pseudogene	Chr11:76367896-76368343 (+)
LP/J	MGP_LPJ_G0010771	pseudogene	Chr11:80802686-80803133 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010671	pseudogene	Chr11:86713911-86714358 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011011	pseudogene	Chr11:79792655-79793102 (+)
PWK/PhJ	MGP_PWKPhJ_G0010379	pseudogene	Chr11:77579785-77580241 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010194	pseudogene	Chr11:79399025-79399472 (+)
WSB/EiJ	MGP_WSBEiJ_G0010545	pseudogene	Chr11:79612058-79612505 (+)

Homology

• Gene Tree
  Gm11200
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm11200
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000081000 (Evidence)
• NCBI Gene
  100042697

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081000	Ensembl Gene Model | MGI Sequence Detail	448	C57BL/6J
transcript	ENSMUST00000121698	Ensembl | MGI Sequence Detail	448	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6