Gm13349 Pseudogene Detail

Summary

• Symbol
  Gm13349
• Name
  predicted gene 13349

• Feature Type
  pseudogene
• IDs
  MGI:3649966
  NCBI Gene: 623325
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:18343390-18343800 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 12.90 cM

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649966	pseudogene	Chr2:18343390-18343800 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011545	pseudogene	Chr2:16034820-16035230 (-)
A/J	MGP_AJ_G0011539	pseudogene	Chr2:15402689-15403099 (-)
AKR/J	MGP_AKRJ_G0011505	pseudogene	Chr2:15895361-15895771 (-)
BALB/cJ	MGP_BALBcJ_G0011520	pseudogene	Chr2:15418391-15418801 (-)
C3H/HeJ	MGP_C3HHeJ_G0011405	pseudogene	Chr2:15810682-15811092 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011812	pseudogene	Chr2:16426110-16426520 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011207	pseudogene	Chr2:15784758-15785166 (-)
CBA/J	MGP_CBAJ_G0011377	pseudogene	Chr2:17178994-17179404 (-)
DBA/2J	MGP_DBA2J_G0011435	pseudogene	Chr2:15317123-15317533 (-)
FVB/NJ	MGP_FVBNJ_G0011437	pseudogene	Chr2:15117058-15117468 (-)
LP/J	MGP_LPJ_G0011501	pseudogene	Chr2:15894628-15895038 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011435	pseudogene	Chr2:17136997-17137407 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011799	pseudogene	Chr2:15834805-15835215 (-)
PWK/PhJ	MGP_PWKPhJ_G0011064	pseudogene	Chr2:15169889-15170297 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010433	pseudogene	Chr13:65791730-65792140 (-)
WSB/EiJ	MGP_WSBEiJ_G0011230	pseudogene	Chr2:15925064-15925474 (-)

Homology

• Gene Tree
  Gm13349
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000082520 (Evidence)
• NCBI Gene
  623325

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082520	Ensembl Gene Model | MGI Sequence Detail	411	C57BL/6J
transcript	ENSMUST00000118436	Ensembl | MGI Sequence Detail	411	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;