Gm11259 Pseudogene Detail

Summary

• Symbol
  Gm11259
• Name
  predicted gene 11259

• Feature Type
  pseudogene
• IDs
  MGI:3649975
  NCBI Gene: 100039833
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:75298997-75299711 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 36.66 cM

Strain
Comparison

• SNPs within 2kb
  155 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649975	pseudogene	Chr4:75298997-75300125 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012717	pseudogene	Chr4:74652578-74653292 (+)
A/J	MGP_AJ_G0012703	pseudogene	Chr4:72144673-72145387 (+)
AKR/J	MGP_AKRJ_G0012675	pseudogene	Chr4:73938433-73939147 (+)
BALB/cJ	MGP_BALBcJ_G0012686	pseudogene	Chr4:72283090-72283804 (+)
C3H/HeJ	MGP_C3HHeJ_G0012545	pseudogene	Chr4:74518728-74519442 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013015	pseudogene	Chr4:77612980-77613694 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011308	pseudogene	Chr4:68451529-68452233 (+)
CAST/EiJ	MGP_CASTEiJ_G0012300	pseudogene	Chr4:72446028-72446746 (+)
CBA/J	MGP_CBAJ_G0012522	pseudogene	Chr4:79931593-79932307 (+)
DBA/2J	MGP_DBA2J_G0012582	pseudogene	Chr4:71899195-71899909 (+)
FVB/NJ	MGP_FVBNJ_G0012585	pseudogene	Chr4:70962985-70963699 (+)
LP/J	MGP_LPJ_G0012655	pseudogene	Chr4:75067642-75068356 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012594	pseudogene	Chr4:84093519-84094233 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013020	pseudogene	Chr4:74041044-74041758 (+)
PWK/PhJ	MGP_PWKPhJ_G0012125	pseudogene	Chr4:70317843-70318557 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011939	pseudogene	Chr4:71432190-71432904 (+)
WSB/EiJ	MGP_WSBEiJ_G0012324	pseudogene	Chr4:74143405-74144119 (+)

Homology

• Gene Tree
  Gm11259
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm11259
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084026 (Evidence)
• NCBI Gene
  100039833

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084026	Ensembl Gene Model | MGI Sequence Detail	715	C57BL/6J
transcript	ENSMUST00000120554	Ensembl | MGI Sequence Detail	715	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;