Gm13160 Pseudogene Detail

Summary

• Symbol
  Gm13160
• Name
  predicted gene 13160

• Feature Type
  pseudogene
• IDs
  MGI:3649984
  NCBI Gene: 666514
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:147170815-147171441 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 78.43 cM

Strain
Comparison

• SNPs within 2kb
  52 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649984	pseudogene	Chr4:147170667-147171458 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010504	pseudogene	Chr10:23871678-23872287 (-)
A/J	MGP_AJ_G0010495	pseudogene	Chr10:23141722-23142331 (-)
AKR/J	MGP_AKRJ_G0010461	pseudogene	Chr10:23537901-23538510 (-)
BALB/cJ	MGP_BALBcJ_G0010471	pseudogene	Chr10:23278394-23279003 (-)
C3H/HeJ	MGP_C3HHeJ_G0010399	pseudogene	Chr10:23745922-23746531 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010742	pseudogene	Chr10:24625557-24626166 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0010365	pseudogene	Chr10:25774122-25774731 (-)
DBA/2J	MGP_DBA2J_G0010398	pseudogene	Chr10:22880083-22880692 (-)
FVB/NJ	MGP_FVBNJ_G0010230	pseudogene	Chr1:112361411-112362019 (+)
LP/J	MGP_LPJ_G0010487	pseudogene	Chr10:23857722-23858331 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010318	pseudogene	Chr1:194864462-194865070 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010641	pseudogene	Chr1:173085113-173085721 (-)
PWK/PhJ	MGP_PWKPhJ_G0010118	pseudogene	Chr10:22683705-22684436 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010223	pseudogene	Chr1:173194500-173195108 (-)

Homology

• Gene Tree
  Gm13160
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13160
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000094017 (Evidence)
• NCBI Gene
  666514

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000094017	Ensembl Gene Model | MGI Sequence Detail	627	C57BL/6J
transcript	ENSMUST00000118441	Ensembl | MGI Sequence Detail	627	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;