Gm11622 Pseudogene Detail

Summary

• Symbol
  Gm11622
• Name
  predicted gene 11622

• Feature Type
  pseudogene
• IDs
  MGI:3650005
  NCBI Gene: 100416398
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:104921983-104922673 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 68.61 cM

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650005	pseudogene	Chr11:104921983-104922673 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010856	pseudogene	Chr11:108240034-108240722 (+)
A/J	MGP_AJ_G0010853	pseudogene	Chr11:103609645-103610335 (+)
AKR/J	MGP_AKRJ_G0010813	pseudogene	Chr11:106764958-106765646 (+)
BALB/cJ	MGP_BALBcJ_G0010831	pseudogene	Chr11:104045569-104046257 (+)
C3H/HeJ	MGP_C3HHeJ_G0010732	pseudogene	Chr11:107034994-107035682 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011102	pseudogene	Chr11:111582314-111583004 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009712	pseudogene	Chr11:100967156-100967871 (+)
CAST/EiJ	MGP_CASTEiJ_G0010557	pseudogene	Chr11:108082862-108083550 (+)
CBA/J	MGP_CBAJ_G0010703	pseudogene	Chr11:116214020-116214708 (+)
DBA/2J	MGP_DBA2J_G0010750	pseudogene	Chr11:103116228-103116916 (+)
FVB/NJ	MGP_FVBNJ_G0010768	pseudogene	Chr11:102634975-102635663 (+)
LP/J	MGP_LPJ_G0010838	pseudogene	Chr11:108697692-108698380 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010744	pseudogene	Chr11:115501172-115501860 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011081	pseudogene	Chr11:107220982-107221671 (+)
PWK/PhJ	MGP_PWKPhJ_G0010447	pseudogene	Chr11:104203366-104204054 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010263	pseudogene	Chr11:106977871-106978563 (+)
WSB/EiJ	MGP_WSBEiJ_G0010609	pseudogene	Chr11:107194301-107194989 (+)

Homology

• Gene Tree
  Gm11622
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082767 (Evidence)
• NCBI Gene
  100416398

Representative Sequences			Length	Strain/Species
genomic	100416398	NCBI Gene Model | MGI Sequence Detail	691	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;