Gm12310 Pseudogene Detail

Summary

• Symbol
  Gm12310
• Name
  predicted gene 12310

• Feature Type
  pseudogene
• IDs
  MGI:3650025
  NCBI Gene: 668442
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:69841624-69842115 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 42.94 cM

Strain
Comparison

• SNPs within 2kb
  38 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650025	pseudogene	Chr11:69841547-69842507 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010758	pseudogene	Chr11:70439340-70439831 (+)
A/J	MGP_AJ_G0010754	pseudogene	Chr11:67772474-67772965 (+)
AKR/J	MGP_AKRJ_G0010711	pseudogene	Chr11:69794807-69795298 (+)
BALB/cJ	MGP_BALBcJ_G0010727	pseudogene	Chr11:68104442-68104933 (+)
C3H/HeJ	MGP_C3HHeJ_G0010637	pseudogene	Chr11:69832160-69832651 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011003	pseudogene	Chr11:72566030-72566521 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009631	pseudogene	Chr11:64701002-64701482 (+)
CAST/EiJ	MGP_CASTEiJ_G0010460	pseudogene	Chr11:70076876-70077958 (+)
CBA/J	MGP_CBAJ_G0010611	pseudogene	Chr11:75818840-75819331 (+)
DBA/2J	MGP_DBA2J_G0010651	pseudogene	Chr11:67358543-67359034 (+)
FVB/NJ	MGP_FVBNJ_G0010665	pseudogene	Chr11:67007040-67007531 (+)
LP/J	MGP_LPJ_G0010739	pseudogene	Chr11:71023333-71023824 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010641	pseudogene	Chr11:76410359-76410850 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010977	pseudogene	Chr11:70068006-70068497 (+)
PWK/PhJ	MGP_PWKPhJ_G0010355	pseudogene	Chr11:68010695-68011186 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010165	pseudogene	Chr11:69886626-69887115 (+)
WSB/EiJ	MGP_WSBEiJ_G0010518	pseudogene	Chr11:69731887-69732378 (+)

Homology

• Gene Tree
  Gm12310
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12310
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084251 (Evidence)
• NCBI Gene
  668442

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084251	Ensembl Gene Model | MGI Sequence Detail	492	C57BL/6J
transcript	ENSMUST00000118013	Ensembl | MGI Sequence Detail	492	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6