Rpl31-ps10 Pseudogene Detail

Summary

• Symbol
  Rpl31-ps10
• Name
  ribosomal protein L31, pseudogene 10
• Synonyms
  Gm13004

• Feature Type
  pseudogene
• IDs
  MGI:3650100
  NCBI Gene: 665533
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:137122610-137122987 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 69.88 cM

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650100	pseudogene	Chr4:137122540-137123020 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012914	pseudogene	Chr4:140010247-140010624 (+)
A/J	MGP_AJ_G0012899	pseudogene	Chr4:134056181-134056547 (+)
AKR/J	MGP_AKRJ_G0012869	pseudogene	Chr4:137912653-137913006 (+)
BALB/cJ	MGP_BALBcJ_G0012875	pseudogene	Chr4:134718931-134719308 (+)
C3H/HeJ	MGP_C3HHeJ_G0012735	pseudogene	Chr4:138216723-138217081 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013217	pseudogene	Chr4:144979929-144980306 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0012706	pseudogene	Chr4:149035021-149035376 (+)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0012778	pseudogene	Chr4:133425977-133426354 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0012792	pseudogene	Chr4:153127012-153127389 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rpl31-ps10
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Rpl31-ps10
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14
• RefSeq
  1

• Ensembl
  ENSMUSG00000070667 (Evidence)
• NCBI Gene
  665533

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000070667	Ensembl Gene Model | MGI Sequence Detail	378	C57BL/6J
transcript	ENSMUST00000116034	Ensembl | MGI Sequence Detail	378	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;