Gm11665 Gene Detail

Summary

• Symbol
  Gm11665
• Name
  predicted gene 11665
• Synonyms
  Gm11664

• Feature Type
  lncRNA gene
• IDs
  MGI:3650128
  NCBI Gene: 100415912
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:104447615-104448603 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 67.79 cM

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650128	lncRNA gene	Chr11:104447615-104453024 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003076	antisense lncRNA gene	Chr11:107719176-107720165 (-)
A/J	MGP_AJ_G0003053	antisense lncRNA gene	Chr11:103136583-103137571 (-)
AKR/J	MGP_AKRJ_G0003034	antisense lncRNA gene	Chr11:106282606-106283594 (-)
BALB/cJ	MGP_BALBcJ_G0003040	antisense lncRNA gene	Chr11:103568795-103569728 (-)
C3H/HeJ	MGP_C3HHeJ_G0002996	antisense lncRNA gene	Chr11:106525291-106526280 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003182	antisense lncRNA gene	Chr11:111049552-111050540 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002719	antisense lncRNA gene	Chr11:100525776-100526751 (-)
CAST/EiJ	MGP_CASTEiJ_G0002966	antisense lncRNA gene	Chr11:107585283-107586270 (-)
CBA/J	MGP_CBAJ_G0002993	antisense lncRNA gene	Chr11:115651608-115652596 (-)
DBA/2J	MGP_DBA2J_G0002999	antisense lncRNA gene	Chr11:102622560-102623549 (-)
FVB/NJ	MGP_FVBNJ_G0003018	antisense lncRNA gene	Chr11:102160087-102161075 (-)
LP/J	MGP_LPJ_G0003075	antisense lncRNA gene	Chr11:108194067-108195056 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003006	antisense lncRNA gene	Chr11:114969784-114970772 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003186	antisense lncRNA gene	Chr11:106686983-106687971 (-)
PWK/PhJ	MGP_PWKPhJ_G0002924	antisense lncRNA gene	Chr11:103728816-103729871 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002868	antisense lncRNA gene	Chr11:106456112-106457116 (-)
WSB/EiJ	MGP_WSBEiJ_G0002996	antisense lncRNA gene	Chr11:106697604-106698592 (-)

Homology

• Gene Tree
  Gm11665
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000086222 (Evidence)
• NCBI Gene
  100415912

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086222	Ensembl Gene Model | MGI Sequence Detail	989	C57BL/6J
transcript	ENSMUST00000148136	Ensembl | MGI Sequence Detail	285	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

Other
Accession IDs

MGI:3650129

References

• Summaries
  All 8
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;