Gm12585 Pseudogene Detail

Summary

• Symbol
  Gm12585
• Name
  predicted gene 12585

• Feature Type
  pseudogene
• IDs
  MGI:3650149
  NCBI Gene: 666325
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:45338745-45339034 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 23.86 cM

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650149	pseudogene	Chr4:45338637-45339046 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012631	pseudogene	Chr4:43569228-43569517 (-)
A/J	MGP_AJ_G0012622	pseudogene	Chr4:42008458-42008751 (-)
AKR/J	MGP_AKRJ_G0012590	pseudogene	Chr4:43009195-43009484 (-)
BALB/cJ	MGP_BALBcJ_G0012606	pseudogene	Chr4:42088309-42088602 (-)
C3H/HeJ	MGP_C3HHeJ_G0012468	pseudogene	Chr4:43614163-43614456 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012925	pseudogene	Chr4:45208376-45208665 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011243	pseudogene	Chr4:39398758-39399037 (-)
CAST/EiJ	MGP_CASTEiJ_G0012223	pseudogene	Chr4:43162045-43162341 (-)
CBA/J	MGP_CBAJ_G0012446	pseudogene	Chr4:46615668-46615957 (-)
DBA/2J	MGP_DBA2J_G0012504	pseudogene	Chr4:41903214-41903503 (-)
FVB/NJ	MGP_FVBNJ_G0012505	pseudogene	Chr4:41134728-41135017 (-)
LP/J	MGP_LPJ_G0012573	pseudogene	Chr4:43617134-43617423 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012510	pseudogene	Chr4:49756544-49756833 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012925	pseudogene	Chr4:43221901-43222190 (-)
PWK/PhJ	MGP_PWKPhJ_G0012053	pseudogene	Chr4:41973965-41974261 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011868	pseudogene	Chr4:42729401-42729694 (-)
WSB/EiJ	MGP_WSBEiJ_G0012246	pseudogene	Chr4:43113430-43113726 (-)

Homology

• Gene Tree
  Gm12585
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000083541 (Evidence)
• NCBI Gene
  666325

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083541	Ensembl Gene Model | MGI Sequence Detail	290	C57BL/6J
transcript	ENSMUST00000117307	Ensembl | MGI Sequence Detail	290	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;