Gm12734 Pseudogene Detail

Summary

• Symbol
  Gm12734
• Name
  predicted gene 12734

• Feature Type
  pseudogene
• IDs
  MGI:3650213
  NCBI Gene: 100418357
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:77432959-77433906 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 46.65 cM

Strain
Comparison

• SNPs within 2kb
  96 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650213	pseudogene	Chr11:77432890-77434103 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0010779	pseudogene	Chr11:75488152-75490752 (+)
AKR/J	MGP_AKRJ_G0010736	pseudogene	Chr11:77779803-77780750 (+)
BALB/cJ	MGP_BALBcJ_G0010752	pseudogene	Chr11:75874351-75875632 (+)
C3H/HeJ	MGP_C3HHeJ_G0010660	pseudogene	Chr11:77802068-77803015 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011026	pseudogene	Chr11:80916407-80918116 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0010634	pseudogene	Chr11:84430151-84431098 (+)
DBA/2J	MGP_DBA2J_G0010673	pseudogene	Chr11:75075261-75076208 (+)
FVB/NJ	MGP_FVBNJ_G0010690	pseudogene	Chr11:74645554-74646501 (+)
LP/J	MGP_LPJ_G0010763	pseudogene	Chr11:79011265-79012729 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010664	pseudogene	Chr11:84886798-84887745 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011003	pseudogene	Chr11:77989514-77992531 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010538	pseudogene	Chr11:77813690-77814637 (+)

Homology

• Gene Tree
  Gm12734
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12734
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000081451 (Evidence)
• NCBI Gene
  100418357

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081451	Ensembl Gene Model | MGI Sequence Detail	948	C57BL/6J
transcript	ENSMUST00000120228	Ensembl | MGI Sequence Detail	948	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6