Gm11205 Gene Detail

Summary

• Symbol
  Gm11205
• Name
  predicted gene 11205

• Feature Type
  lncRNA gene
• IDs
  MGI:3650272
  NCBI Gene: 102632809
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:79595396-79595840 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 47.02 cM

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650272	lncRNA gene	Chr11:79595396-79596246 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005264	lincRNA gene	Chr11:80823457-80824247 (+)
A/J	MGP_AJ_G0005249	lincRNA gene	Chr11:77713708-77714498 (+)
AKR/J	MGP_AKRJ_G0005227	lincRNA gene	Chr11:80045872-80046666 (+)
BALB/cJ	MGP_BALBcJ_G0005229	lincRNA gene	Chr11:78118896-78119690 (+)
C3H/HeJ	MGP_C3HHeJ_G0005178	lincRNA gene	Chr11:80103780-80104570 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005381	lincRNA gene	Chr11:83306905-83307695 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004775	lincRNA gene	Chr11:74657968-74658761 (+)
CAST/EiJ	MGP_CASTEiJ_G0005125	lincRNA gene	Chr11:80569416-80570206 (+)
CBA/J	MGP_CBAJ_G0005168	lincRNA gene	Chr11:86924803-86925593 (+)
DBA/2J	MGP_DBA2J_G0005185	lincRNA gene	Chr11:77264219-77265009 (+)
FVB/NJ	MGP_FVBNJ_G0005210	lincRNA gene	Chr11:76861956-76862746 (+)
LP/J	MGP_LPJ_G0005266	lincRNA gene	Chr11:81334417-81335207 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005193	lincRNA gene	Chr11:87223467-87224257 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005385	lincRNA gene	Chr11:80303230-80304020 (+)
PWK/PhJ	MGP_PWKPhJ_G0005074	lincRNA gene	Chr11:78082606-78083400 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004996	lincRNA gene	Chr11:79911166-79911964 (+)
WSB/EiJ	MGP_WSBEiJ_G0005173	lincRNA gene	Chr11:80131439-80132229 (+)

Homology

• Gene Tree
  Gm11205
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  10 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  1
• Targeted
  1
• Genomic Mutations
  2 involving Gm11205
• Find Mice (IMSR)
  2 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084969 (Evidence)
• NCBI Gene
  102632809

Representative Sequences			Length	Strain/Species
genomic	102632809	NCBI Gene Model | MGI Sequence Detail	445	C57BL/6J
transcript	XR_880034	RefSeq | MGI Sequence Detail	324	C57BL/6J

References

• Summaries
  All 16

  Phenotypes 10
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52